CF832190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.500e-45 Identity = 83/139 (59.71%), Postives = 101/139 (72.66%), Query Frame = -2 Query: 210 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 626 PC +YYGRGPIQL+ N NY G A+GVDLL NPDL+ATD V FK+AIW WMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG+ + V +RIGF+ +C G+ G+NLDC +QRP+ Sbjct: 127 PCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.225e-44 Identity = 84/143 (58.74%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 198 CPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 623 C QY GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIW WM Q PKPSCH VI W PSA D+ AGR+PGYG+ TNIINGGIECG G N A +RIGF+ +C G G NLDC QRP+G L Sbjct: 191 CVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.600e-44 Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = -2 Query: 210 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 605 YYGRGPIQLT NY G ALG+DL+ NPDL++TD VVSFK+AIW WMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIINGGIECG NDA +RIG++ +C G G NLDC NQR + Sbjct: 128 YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.600e-44 Identity = 79/140 (56.43%), Postives = 101/140 (72.14%), Query Frame = -2 Query: 207 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 626 PC +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D VSF +A W WMT Q PKPSCH V +W PSA+D AGR+PGYG+ TNIINGG+ECG+ +D V +RIGF+ +C G+ NLDC +QRP+G Sbjct: 186 PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.080e-44 Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = -2 Query: 210 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 605 +YGRGPIQLT NY G+A+G DL+NNPDL+ATD VSFK+AIW WMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG N V +RIGF+ +C + PGDNLDC +QR + Sbjct: 113 FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43 Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = -2 Query: 210 QYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 608 +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIW WMT Q KPSCH VII +W PS D A R+PGYG+ TNIING ECG N A +RIGF+ +CG + G+NLDC+NQ+ + Sbjct: 116 RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43 Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = -2 Query: 264 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCG 626 PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIW WMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG + V++RIGF+ +CG Sbjct: 181 PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43 Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = -2 Query: 210 QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 608 +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIW WMT Q KPS H+VII W PSA D +A R PG G+ TNIINGGIECG N AV +RIG++ +CG + PGDNLDC NQR + Sbjct: 118 RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.163e-41 Identity = 79/132 (59.85%), Postives = 93/132 (70.45%), Query Frame = -2 Query: 210 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 605 YYGRGPIQLT NY G+A+ DL+NNPDL+ATD VSFK+AIW WMT Q KPSCH+VI W PSA D +A R+PGYG+ TNIINGGIECG N V +RIG++ + PGDNLDC NQR + Sbjct: 120 YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 3.453e-39 Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = -2 Query: 195 NCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 572 N NY CG+ L + LL P+L+ TDP ++FK+A+W WMT Q PKPSCH VI + W PSA D AGR+PGYG+ TNIINGGIECG G N+A NRIGF+ T+C G G NLDC QRP+G L+ Sbjct: 171 NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297 The following BLAST results are available for this feature:
BLAST of CF832190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832190 ID=CF832190; Name=CF832190; organism=Citrus sinensis; type=EST; length=627bpback to top |