CF832196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.174e-49 Identity = 94/145 (64.83%), Postives = 112/145 (77.24%), Query Frame = -2 Query: 343 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 777 KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K Sbjct: 21 KVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.028e-47 Identity = 92/145 (63.45%), Postives = 111/145 (76.55%), Query Frame = -2 Query: 343 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 777 KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRESKKID+HMYH +Y++ KGNVFKNKR+LME IHK KA++AR+K LSDQ EA+R+K Sbjct: 21 KVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSK 165
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.754e-47 Identity = 91/145 (62.76%), Postives = 110/145 (75.86%), Query Frame = -2 Query: 343 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 777 KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRE+KKID+HMYH +Y++ KGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R K Sbjct: 21 KVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTK 165
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.896e-44 Identity = 85/146 (58.22%), Postives = 106/146 (72.60%), Query Frame = -2 Query: 340 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 777 +VW+DPNE+ +++MANSR N+R+L+ GFI+RKP +HSRSRAR AKR GRH G G R GTREARLP+KI +KYRE+KKIDKH Y ++Y+K KGNVFKNKR L+E I KSK EK REK + DQ +A+R KN Sbjct: 21 RVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKN 166
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.006e-43 Identity = 84/146 (57.53%), Postives = 108/146 (73.97%), Query Frame = -2 Query: 340 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 777 +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP +HSR RAR +EA+RKGRH+GYGKR+GT AR+P K R+YR++KK+DKH+YH++Y++ KGN FKNK+ L+E I K K E R K L+DQ +A+R KN Sbjct: 21 RVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKN 166
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.423e-43 Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 343 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 777 KVW+DPNE++EIS ANSRQNIRKLVKDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + RKYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 21 KVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.838e-43 Identity = 82/145 (56.55%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 343 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 777 KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + RKYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 21 KVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 168.318 bits (425), Expect = 4.184e-41 Identity = 80/146 (54.79%), Postives = 107/146 (73.29%), Query Frame = -2 Query: 340 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 777 KVWLDPNE +EI+ ANSR IRKLVK+G I++K +HS+SR R ++KR+GRHSGYGKRKGTREARLP+++ KYR++ KIDKH+YH +Y + KGN FK+KR L+E I ++KA+ REK L+++ EA+R KN Sbjct: 21 KVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKN 166
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = -2 Query: 424 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 777 +VW+DP +V+E++ A +R++IR+L+K+G I +KP + SR RAR E K+KGRH G G RKG + AR+ K RK +E KKID+ Y +Y++ KG FKNK L Sbjct: 21 RVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.387e-20 Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = -2 Query: 385 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAR 777 ++W+DP V++++ A +R++IR+L+K+G I +KP K SR RAR E K+KGRH G G RKG + AR+ K RK +E KKID+ Y +Y++ KG FK+K L + + K R Sbjct: 21 RIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151 The following BLAST results are available for this feature:
BLAST of CF832196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832196 ID=CF832196; Name=CF832196; organism=Citrus sinensis; type=EST; length=778bpback to top |