CF832196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = -2 Query: 424 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 777 ++W+DP +++++ A +R++I++L+K+G I +KP K SR RA+ E K+KGRH G G RKG + AR+ K RK + KKID+ Y +Y++ KG FKNK L Sbjct: 21 RIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.658e-16 Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = -2 Query: 433 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNK 777 +VW+DP +++ + MA S+ +IR L+K+G I +K K S +R +++KE ++KGR G G R+G AR P K ++ R+S KID+ +Y +Y KG F+++ Sbjct: 23 RVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.355e-15 Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = -2 Query: 643 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARR 777 KVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR ++ Sbjct: 18 KVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.312e-15 Identity = 38/115 (33.04%), Postives = 66/115 (57.39%), Query Frame = -2 Query: 433 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNK 777 +VW+DP + ++ MA ++ +IR L+ DG I++K K S +R + ++E KRKG+ G G R+G + AR P K ++ RE++KI++ Y +Y KG F+++ Sbjct: 20 RVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = -2 Query: 433 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNK 777 ++W+DP ++E+S A +R +++L+KDG I KP K S R++++ + K+KGR G G KG + AR P K ++ R++++I+K Y +Y KG FK+K Sbjct: 20 RIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
BLAST of CF832196 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = -2 Query: 436 KVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKN 777 +VW DP + +I+ A ++Q+IR+L++ G I RKP SR+R + K KRKGR G+G RKG + AR+P K R+ + +D+ Y +Y K KG F++ Sbjct: 23 RVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136 The following BLAST results are available for this feature:
BLAST of CF832196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832196 ID=CF832196; Name=CF832196; organism=Citrus sinensis; type=EST; length=778bpback to top |