CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STAMF (50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35 Identity = 74/140 (52.86%), Postives = 102/140 (72.86%), Query Frame = -2 Query: 313 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 732 M K+G+G A ++ R++ GL V + V ADN+GAK + II V G KGRL R+P A +GD+V+ TVKKG P++RK+V+ AVIVRQ++P+RR DG ++ FEDNA IV P+G KGS I GPI KE A+ WP++A+ A +V Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDLVVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGPIAKEVAERWPQLANIATIVV 140
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_THEAC (50S ribosomal protein L14P OS=Thermoplasma acidophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35 Identity = 67/126 (53.17%), Postives = 95/126 (75.40%), Query Frame = -2 Query: 313 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 690 R + GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM MA+VKKG P++R KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ A+ IV Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL23_ENCCU (60S ribosomal protein L23 OS=Encephalitozoon cuniculi GN=RPL23 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35 Identity = 67/127 (52.76%), Postives = 97/127 (76.38%), Query Frame = -2 Query: 316 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 696 +++M+ G+ V + CADN+GAK L I VK +GRLNRLP+A GD+ + +VKKGKP+LRKKV A+++RQ+K WRR DG + FEDNA V++N KGE++G+ I GP+ +E AD+WP+I+S A++I Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPKISSQASSI 145
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_THEVO (50S ribosomal protein L14P OS=Thermoplasma volcanium GN=rpl14p PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35 Identity = 69/133 (51.88%), Postives = 98/133 (73.68%), Query Frame = -2 Query: 313 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 711 G AG + R GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM +A+VKKG P++R KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ A+ IV Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_HYPBU (50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl14p PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34 Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = -2 Query: 313 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 723 +G G AG + ++ GL V + V ADN+GAK II V G KGRL R+P A VGDMV+ TVKKG P++RK+V+ A+++RQR+P+RR DG ++ FEDNA VIV+P G KGS I GP+ +E A+ WP++A+ A+ I+ Sbjct: 3 KGAAG-AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGTPEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERWPKVANIASIII 138
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METKA (50S ribosomal protein L14P OS=Methanopyrus kandleri GN=rpl14p PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34 Identity = 73/121 (60.33%), Postives = 90/121 (74.38%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 675 LPV A + CADNTGA+ L II+VKG KG RLP+A +GDMV+ +VK+G PD+RK+V+ AVIVRQRK +RR DG + FEDNA VIV P G +GS I GP+ KE A+ WPRI S A+ IV Sbjct: 13 LPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNAVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERWPRIGSIASIIV 133
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_AERPE (50S ribosomal protein L14P OS=Aeropyrum pernix GN=rpl14p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34 Identity = 72/140 (51.43%), Postives = 101/140 (72.14%), Query Frame = -2 Query: 313 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 732 M+K+ + G +++ ++ GL V + V ADN+GAK + IISV +K RL RLPSA VGD+V+ +VKKG P +R++V+ AV+VRQR+P+RR DG ++ FEDNA VIVNP G +GS + GPI +E A+ WPR+A A IV Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDLVVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGPIAREAAERWPRVAKIATMIV 140
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33 Identity = 70/126 (55.56%), Postives = 94/126 (74.60%), Query Frame = -2 Query: 313 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 690 +++ LPV A + C DNTGA+ + IISV+G KG RL +A VGDMV+ +VKKG D+R++V+ AVIVRQ+K +RR DG+ + FEDNA VIV+P+G +KGS I GP+ KE AD WP + SAA+ IV Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGSAASIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METST (50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl14p PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33 Identity = 72/125 (57.60%), Postives = 90/125 (72.00%), Query Frame = -2 Query: 313 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 687 +S LP+ A + C DNTGA+ + IISVKG KG RL SA VGDMV+ +VKKG D+R++V AV+VRQ+K +RR DG+ + FEDNA VI+ G +KGS I GPI KE ADLWP I SAA+ IV Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRREVTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLWPAIGSAASIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 66/126 (52.38%), Postives = 92/126 (73.02%), Query Frame = -2 Query: 313 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 690 R + GLP+ A + C DNTGAK + +I VK + R+P+A VGDM +A+VKKG P++R KV+ AV+VRQR+P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ ++ IV Sbjct: 7 RETRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAISSTIV 132 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |