CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24 Identity = 55/121 (45.45%), Postives = 80/121 (66.12%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 675 L + CADNTGA+ + I+SV G G R P +GD+ TVKKG PD+RKK++ AV++RQ+K RR +G+ + F+DNA V+V+ K E KG+ I GP+ +E A+ +P++ S A IV Sbjct: 12 LATGTKLTCADNTGARIVQIVSVFGYHGVRRRQPKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPVAREVAERYPKLGSMATIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METLZ (50S ribosomal protein L14P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 51/121 (42.15%), Postives = 83/121 (68.60%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 675 L + + CADNTGA+ + I+SV G G NR P +GD+ TVKKG PD+++K++ AV+VRQ+K +RR +G+ + FE+NA +++N G+ +G+ I GP+ +E A+ +P++ S A I+ Sbjct: 12 LQTGSKMVCADNTGARVVQIVSVFGYHGVKNRQPKMGLGDLATVTVKKGTPDMKRKLVRAVVVRQKKEFRRPNGLRVSFEENAMILLNENGDPRGTDIKGPVAREVAERFPKVGSMATIII 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_UNCMA (50S ribosomal protein L14P OS=Uncultured methanogenic archaeon RC-I GN=rpl14p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23 Identity = 52/128 (40.62%), Postives = 84/128 (65.62%), Query Frame = -2 Query: 313 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 696 K ++ + A + ADNTGA+ + +ISV +GR NR+P A +GD+ + +VKKG P++RK ++ V++RQ+K +RR G+ + FEDNA V+V+ + KG+ I GP+ +E A+ + +I S A IV Sbjct: 5 KAKIPRSVHTATRLEVADNTGARLVEVISVLKYRGRKNRMPKAGIGDIFIGSVKKGTPEMRKTIVRCVVIRQKKEYRRPSGLRVSFEDNACVLVDDNNDPKGTEIKGPVAREVAERYAKIGSTATIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METMJ (50S ribosomal protein L14P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22 Identity = 52/121 (42.98%), Postives = 80/121 (66.12%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 675 L + + C+DNTGA+ + ++SV G R P +GD+ +VKKG PD+R+K+ AV++RQ+K RR +G+ + FEDNA V++N +GE KG+ I G + +E A+ +P+IAS A IV Sbjct: 12 LATGSRMVCSDNTGARLVEVVSVDRYHGVRRRQPCLGLGDVATVSVKKGTPDMRRKLEKAVVIRQKKEIRRPNGIRLSFEDNAMVLINERGEPKGTEIKGAVPREIAERFPKIASMATTIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METHJ (50S ribosomal protein L14P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl14p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 657 + CADNTGA+ + ++SV G G R P + D+ +VKKG PD+R+K++ AV++RQ+K RR G+ + FEDNA V+V+ K E +G+ I GP+ +E A +PRI S A IV Sbjct: 18 LTCADNTGARVVQVVSVFGYHGVRRRQPKLGLADIATVSVKKGTPDMRRKLVRAVVIRQKKEIRRPSGLRLSFEDNAVVVVDDKNEPRGTEIKGPVAREVAIRYPRIGSMATIIV 132
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_DEHE1 (50S ribosomal protein L14 OS=Dehalococcoides ethenogenes (strain 195) GN=rplN PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = -2 Query: 352 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 657 +N ADNTGAK + I+V G +L A VGD+++A VKK PD + K V+ AV+VR KP+ R DG ++ F+DNA VI+N K E KG+ I GP+ +E D Sbjct: 8 LNVADNTGAKKIMCINVLGGSRKLQ----AKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_DEHSC (50S ribosomal protein L14 OS=Dehalococcoides sp. (strain CBDB1) GN=rplN PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = -2 Query: 352 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 657 +N ADNTGAK + I+V G ++ A VGD+++A VKK PD + K V+ AV+VR KP+ R DG ++ F+DNA VI+N K E KG+ I GP+ +E D Sbjct: 8 LNVADNTGAKKIMCINVLGGSHKIQ----AKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_DEHSB (50S ribosomal protein L14 OS=Dehalococcoides sp. (strain BAV1) GN=rplN PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = -2 Query: 352 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 657 +N ADNTGAK + I+V G ++ A VGD+++A VKK PD + K V+ AV+VR KP+ R DG ++ F+DNA VI+N K E KG+ I GP+ +E D Sbjct: 8 LNVADNTGAKKIMCINVLGGSHKIQ----AKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_THERP (50S ribosomal protein L14 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplN PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = -2 Query: 325 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 648 ADNTGAK + I V G G +R + VGD+++A+VKK +P+ K V+ AVIVR +K +RRKDG ++ F+DNA V+V P+G+ +G+ I GP+ +E + + RI S A Sbjct: 11 ADNTGAKEIMCIRVLG--GSKHRYGT--VGDLIVASVKKAEPNAAVKKGDVVYAVIVRTKKEYRRKDGSYIKFDDNAAVLVTPQGQPRGTRIFGPVARELREKHYMRIISLA 118
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_SACEN (50S ribosomal protein L14 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplN PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15 Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADN+GAK + I V G GR A +GD+++ATVK P K V+ AVIVRQ+K RR DG ++ F++NA V++ P GE +G+ I GP+G+E D Sbjct: 11 ADNSGAKEILTIRVLGGSGRRY----AGIGDIIVATVKDAIPGANVKKGEVVKAVIVRQKKEKRRADGSYIRFDENAAVLIKPSGEPRGTRIFGPVGRELRD 108 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |