CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_LEIXX (50S ribosomal protein L14 OS=Leifsonia xyli subsp. xyli GN=rplN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13 Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADNTGAK L I V G GR A +GD+++ATVK P K V+ AVIVR RK RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKELLTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGDVVKAVIVRTRKNTRRTDGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BEUC1 (50S ribosomal protein L14 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rplN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADNTGAK + I V G GR A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA V++ GE +G+ I GP+G+E D + RI S A ++ Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTAKERRRPDGSYIRFDENAAVLLKSDGEPRGTRIFGPVGRELRDKKFMRIVSLAPEVI 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_ACAM1 (50S ribosomal protein L14 OS=Acaryochloris marina (strain MBIC 11017) GN=rplN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 352 TVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 660 T+N ADN+GAK L I V G R VGD+++ATVK P++ K V+ AVIVR RK R+ G+ + F+DNA V++NP G +G+ + GP+ +E D Sbjct: 7 TLNVADNSGAKRLLCIRVIGGGNRRY----GGVGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKSICRESGMSIRFDDNAAVLINPDGNPRGTRVFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_STAPU (50S ribosomal protein L14, chloroplastic OS=Staurastrum punctulatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13 Identity = 44/119 (36.97%), Postives = 72/119 (60.50%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADN+GA+ L I V G R A +GDM++A VK+ P++ + +V+ AVIVR K +R +G+ + F+DNA V+VN +G +G+ + GP+ +E D + +I S A ++ Sbjct: 8 LNVADNSGARRLMCIRVLGSSNR----KYANIGDMIIAVVKEAVPNMPLKKSEVVRAVIVRTCKGIKRNNGMILRFDDNAAVVVNQEGNPRGTRVFGPVARELRDFNFTKIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_GRAFK (50S ribosomal protein L14 OS=Gramella forsetii (strain KT0803) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADNTGAK + I V G G R S VGD ++ +VK+ P+ K V AV+VR RK RR DG ++ F+DNA V++ P+GEM+G+ + GP+ +E D Sbjct: 11 ADNTGAKEVLAIRVLG--GTKKRYAS--VGDKIVVSVKEATPNGSIKKGAVSTAVVVRTRKEVRRPDGSYIRFDDNACVLLGPQGEMRGTRVFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_DESVM (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -2 Query: 361 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 675 + V +T+ ADN+GAK + I V G G R A VGD+V+ +VK+ P + K VM AVIVR RK RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLG--GSKRRY--ATVGDIVVVSVKEALPHCKVKKGDVMQAVIVRTRKEVRRVDGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_CHLRE (50S ribosomal protein L14, chloroplastic OS=Chlamydomonas reinhardtii GN=rpl14 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13 Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = -2 Query: 352 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 657 +N ADN+GA+ L I G R SA +GD+++A VK P++ R ++ AVIVR RK RR++G+ + F+DNA VI+N +G +G+ + GPI +E D Sbjct: 8 LNVADNSGARELMCIRALGGSYR----ESANIGDVIIAVVKDALPNMPVKRSDIVRAVIVRTRKGIRRENGMAIRFDDNAAVIINKEGNPRGTRVFGPIARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_ADICA (50S ribosomal protein L14, chloroplastic OS=Adiantum capillus-veneris GN=rpl14 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13 Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 675 + + + ++ ADN+GA+ L I V G R A +GD+++A VK+ P++ R +V+ AV+VR R+ +R++G+ + F+DNA VI+N +G +G+ I GP+ +E + + R+ S A ++ Sbjct: 2 IQIQSYLDVADNSGARKLMCIRVLGTGNR----KYADIGDIIIAVVKEAVPNMFLKRSEVVRAVVVRTRRGLKRRNGMVLEFDDNAAVIINQEGNPRGTRIFGPVARELRECNFARVVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_THEFY (50S ribosomal protein L14 OS=Thermobifida fusca (strain YX) GN=rplN PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADNTGAK L I V G GR A +GD ++ATVK P K ++ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D + RI S A ++ Sbjct: 11 ADNTGAKELLTIRVLGGSGRRY----ASIGDTIVATVKDALPGAGVKKGDIVKAVVVRTTKERRRPDGFYIRFDENAAVLIKDGGDPRGTRIFGPVGRELRDKKFMRIISLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_SCEOB (50S ribosomal protein L14, chloroplastic OS=Scenedesmus obliquus GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13 Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADN+GA+ L I V G GR +A +GD+++A VK P++ K V+ AVIVR K RR++G+ + F+DNA V++N +G +G+ + GPI +E D + +I S A +V Sbjct: 8 LNVADNSGARKLMCIRVLG-GGR----QTATIGDVIIAVVKDALPNMPLKKSDVVRAVIVRTSKGVRRENGMMLCFDDNAAVVINKEGNPRGTRVFGPIARELRDRNFTKIVSLAPEVV 121 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |