CF832204

Overview
NameCF832204
Unique NameCF832204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:240..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.752e-20
Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR+ISSIEQK E    +  +   R+YR KI+ +L  IC+ +L LL+ +LI +A+  ESKVFYL M GDY+RYL+E  +G  ++
Sbjct:   48 YKNVVGARRSSWRVISSIEQKTERNEKKQQMG--REYREKIEAELQDICNDVLELLDKYLIVNATQPESKVFYLKMKGDYYRYLSEVASGDNKQ 139          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.288e-20
Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAE 303
            +KNV+GA R+SWR+ISSIEQK E  G+E      ++YR K++ +L+ IC  +L LL+  LI  A +AESKVFYL M GDY+RYLAE
Sbjct:   50 YKNVVGARRSSWRVISSIEQKTE--GSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAE 133          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 3.902e-20
Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK E    +  +   ++YR KI+ +L  IC  +L LL+ +LI +A+ AESKVFYL M GDY RYL+E  +G  ++    ++
Sbjct:   50 YKNVVGARRSSWRVISSIEQKTERNEKKQQMG--KEYREKIEAELQDICSDVLELLDKYLILNATHAESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNS 147          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.314e-19
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query:   49 KNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            K  IGA RASWRI+ S+EQK  + G +  V+ I  Y+ K++++L  +C+ +LS++  H +P A+S E+ VF+  M GDY+RYLAEF TG E+K A + +
Sbjct:   50 KKTIGARRASWRILESLEQKVTA-GDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQS 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.639e-18
Identity = 43/100 (43.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R++WR+I   E K  +  T+  ++   +YR K++ +L+ IC+ +L+LLE +L+P+AS  +SKVF+L M GDY+RYLAE  T   R E  + +
Sbjct:   59 YKNVVGARRSAWRVIHGSEMKAVNDRTKKQIA--EEYRIKMEKELNTICNQVLALLEDYLLPNASPDDSKVFFLKMQGDYYRYLAEVATDDARTEVVQKS 156          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.534e-16
Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+GA R+SWRI+SSI +K+   GT         Y  K++ +L+KIC+ +L+LL  +LI     AE+K+FY  M GDY+RYLAE + G +  ++ E+
Sbjct:   61 YKNVVGARRSSWRIMSSIAKKQA--GTPL-ADQTDIYLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEA 156          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.534e-16
Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+GA R+SWRI+SSI +K+   GT         Y  K++ +L+KIC+ +L+LL  +LI     AE+K+FY  M GDY+RYLAE + G +  ++ E+
Sbjct:   61 YKNVVGARRSSWRIMSSIAKKQA--GTPL-ADQTDIYLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEA 156          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.672e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+GA R+SWRI+SSI +K+   GT         Y  K++ +L  IC+ +L+L     I     AE+K+FY  M GDY+RYLAE + G +  ++ E+
Sbjct:   58 YKNVLGARRSSWRIMSSIAKKQA--GTPL-ADQTDIYLKKVEEELIPICNDVLALPVLP-ITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEA 152          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.672e-12
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEY-HVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+GA R+SWRI+SSI +K+   GT   H   I  Y  K++ +L +IC+ +L+L     I     AE+K+FY  M GDY+RY AE + G +  ++ E+
Sbjct:   58 YKNVVGARRSSWRIMSSIAKKQA--GTPLAHQHDI--YLKKVEEELIQICNDVLALPVLP-ITEKIGAEAKIFYYKMMGDYYRYSAEVQEGEQNDKSTEA 152          
The following BLAST results are available for this feature:
BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433B_CHICK1.752e-2050.0014-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]
14331_CAEEL2.288e-2055.8114-3-3-like protein 1 OS=Caenorhabditis elegans GN... [more]
1433B_RAT3.902e-2047.0014-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
14338_ORYSJ4.314e-1945.45Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
14331_SCHMA1.639e-1843.0014-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14332_ECHMU1.534e-1643.4314-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14332_ECHGR1.534e-1643.4314-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14331_ECHMU6.672e-1240.4014-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
14331_ECHGR6.672e-1241.0014-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT
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