CF832204 | Citrus Genome Database

Overview


Name	CF832204
Unique Name	CF832204
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	346

Libraries


Library Name	Type
Ruby Orange Ovary at Anthesis cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7580	contig	Csv1_Contig7580:240..584.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 3.513e-37
Identity = 75/100 (75.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG + HVS IRDYRSKI+ +LS ICDGIL LL++ L+P+A+S +SKVFYL M GDYHRYLAEFK+G ERK+AAE T
Sbjct:   57 YKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHT 156

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.826e-37
Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HVS IRDYRSKI+++LS ICDGIL +L+S LI SAS  +SKVFYL M GDY+RYLAEFKTG ERK AAE+T
Sbjct:   56 YKNVIGARRASWRIISSIEQKEESRGNEGHVSTIRDYRSKIESELSSICDGILKVLDSKLIGSASGGDSKVFYLKMKGDYYRYLAEFKTGDERKLAAENT 155

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 7.826e-37
Identity = 72/100 (72.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIG++RA+WRI+SSIEQKEESR  E HVS ++DYRSK++ +LS IC GIL LL+SHLIPSA+++ESKVFYL M GDYHRYLAEFK+G ERK AAE T
Sbjct:   55 YKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDT 154

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.335e-36
Identity = 73/100 (73.00%), Postives = 88/100 (88.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E  V+ I+DYR KI+ +L+KICDGIL LL+SHL+PS+++ ESKVFYL M GDY+RYLAEFK+G ERK+AAE+T
Sbjct:   56 YKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENT 155

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.277e-36
Identity = 73/100 (73.00%), Postives = 84/100 (84.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEE++G E HV  IR YR+ ++ +LSKIC  IL LL+ HLIP+AS+ ESKVFYL M GDYHRYLAEFKTGA+RKEAAE T
Sbjct:   52 YKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHT 151

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.974e-36
Identity = 69/100 (69.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIG++RA+WRI+SSIEQKEESR  + HVS ++DYRSK++++LS +C GIL LL+SHLIPSA ++ESKVFYL M GDYHRY+AEFK+G ERK AAE T
Sbjct:   55 YKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDT 154

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.073e-36
Identity = 73/100 (73.00%), Postives = 88/100 (88.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ I+ YRSKI+++L+ IC+GIL LL+S LI +A++ +SKVFYL M GDY+RYLAEFKTGAERKEAAE+T
Sbjct:   51 YKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENT 150

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.073e-36
Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ I+ YRS+I+N+L+ IC+GIL LL+S LI SA++ +SKVFYL M GDY+RYLAEFKTG ERKEAAE+T
Sbjct:   52 YKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENT 151

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.073e-36
Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISSIEQKEESRG E HV+ I+ YRS+I+N+L+ IC+GIL LL+S LI SA++ +SKVFYL M GDY+RYLAEFKTG ERKEAAE+T
Sbjct:   51 YKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENT 150

[Close]

BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 9.567e-35
Identity = 67/100 (67.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIG++RA+WRI+SSIEQKEESR  E HV  +++YR K++N+LS++C GIL LLES+L+PSA+++ESKVFYL M GDY+RYLAEFK G ERK+AAE T
Sbjct:   59 YKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDT 158

The following BLAST results are available for this feature:

BLAST of CF832204 vs. ExPASy Swiss-Prot

BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139


Match Name	E-value	Identity	Description
14331_ARATH	3.513e-37	75.00	14-3-3-like protein GF14 chi OS=Arabidopsis thalia...	[more]
1433_HELAN	7.826e-37	77.00	14-3-3-like protein OS=Helianthus annuus PE=2 SV=1	[more]
14338_ARATH	7.826e-37	72.00	14-3-3-like protein GF14 kappa OS=Arabidopsis thal...	[more]
1433B_HORVU	1.335e-36	73.00	14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1	[more]
1433_CHLRE	2.277e-36	73.00	14-3-3-like protein OS=Chlamydomonas reinhardtii P...	[more]
14336_ARATH	2.974e-36	69.00	14-3-3-like protein GF14 lambda OS=Arabidopsis tha...	[more]
1433A_TOBAC	5.073e-36	73.00	14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV...	[more]
14335_SOLLC	5.073e-36	73.00	14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P...	[more]
14332_SOLTU	5.073e-36	73.00	14-3-3-like protein RA215 OS=Solanum tuberosum PE=...	[more]
14310_SOLLC	9.567e-35	67.00	14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT