CF832204

Overview
NameCF832204
Unique NameCF832204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:240..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.159e-30
Identity = 58/100 (58.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRI+SSIEQKEE++G E +   I++YR K++ +LS IC+ ++ +++ HLIPSA++ ES VFY  M GDY+RYLAEFK+G E+KEAA+ +
Sbjct:   52 YKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQS 151          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.095e-30
Identity = 58/100 (58.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRI+SSIEQKEES+G + +   I++YR K++ +LS IC  ++ +++ HLIPSA++ ES VFY  M GDY+RYLAEFKTG E+KEA + +
Sbjct:   52 YKNVIGARRASWRILSSIEQKEESKGNDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQS 151          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.266e-30
Identity = 61/100 (61.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRI+SSIEQKEES+G    V  I++YR KI+ +L  IC  IL++LE HLIP+A+SAESKVFY  M GDY+RYLAEF  G +R+ +A+ +
Sbjct:   51 YKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.696e-29
Identity = 57/98 (58.16%), Postives = 80/98 (81.63%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAE 339
            +KNV+GA RASWRI+SSIEQKEE++G +  V  I++YR K++++LS IC  I+++++ +LIPS+SS E  VF+  M GDY+RYLAEFK+G ERKEAA+
Sbjct:   52 YKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAAD 149          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 126.716 bits (317), Expect = 3.521e-29
Identity = 64/101 (63.37%), Postives = 81/101 (80.20%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRG-TEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRI+SSIEQKEES+  +E+ V  I  YRSKI+ +L+KI D ILS+L+SHLIPSA++ ESKVFY  M GDYHRYLAEF +G  R++A  ++
Sbjct:   50 YKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNAS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 4.599e-29
Identity = 57/98 (58.16%), Postives = 78/98 (79.59%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAE 339
            +KNV+G+ RASWRI+SSIEQKEESRG E +V  I++Y  K++++L+ IC+ I+ +++ HLIPS S+ ES VFY  M GDY+RYLAEFK G ++KE AE
Sbjct:   52 YKNVVGSRRASWRILSSIEQKEESRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAE 149          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 7.844e-29
Identity = 54/98 (55.10%), Postives = 80/98 (81.63%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAE 339
            +KNV+G+ RASWRI+SSIEQKE++RG E +V  I+ YR K++++L+ IC+ I+++++ HLIPS ++ ES VFY  M GDY+RYLAEFKTG ++KE ++
Sbjct:   52 YKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSD 149          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.981e-28
Identity = 59/100 (59.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIG+ RASWRI SSIEQKE  +G + +V  I++Y  K++ +LS IC  I+S+L+ HLIPSAS  ES VF+  M GDY+RYLAEFK+G ERKEAA+ +
Sbjct:   52 YKNVIGSRRASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQS 151          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.523e-27
Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRIISS+EQKE+++G + HV  I+ YR+KI+ +LS  CD +L +++ +L+P AS++ESKVF+  M GDY+RY AEF    +RKE A+ +
Sbjct:   49 YKNVIGAKRASWRIISSLEQKEQAKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKS 148          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.622e-27
Identity = 52/100 (52.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIG+ RASWRII+S+EQKE+++G + HV  I+ YR+KI+++L+K CD +L +++ +L+P+AS++ESKVFY  M GDY+RY AEF    +R+E A+ +
Sbjct:   46 YKNVIGSRRASWRIITSLEQKEQAKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKS 145          
The following BLAST results are available for this feature:
BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433D_SOYBN4.159e-3058.0014-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433B_VICFA7.095e-3058.0014-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
RAD24_SCHPO9.266e-3061.00DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433C_SOYBN2.696e-2958.1614-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
BMH1_YEAST3.521e-2963.37Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14339_SOLLC4.599e-2958.1614-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14338_SOLLC7.844e-2955.1014-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14339_ARATH2.981e-2859.0014-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
14331_ENTHI2.523e-2754.0014-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14333_ENTHI5.622e-2752.0014-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT
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