CF832204

Overview
NameCF832204
Unique NameCF832204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:240..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.790e-26
Identity = 55/100 (55.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNVIGA RASWRI+SSIEQKEES+G + +V  I+ Y+ +++++L+K     LS+++ H++PS++S ES VFY  M GDY+RYLAEFK+G +RKEAA+ +
Sbjct:   50 YKNVIGARRASWRILSSIEQKEESKGHDQNVKRIKTYQQRVEDELTKYAL-TLSVIDEHVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQS 148          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+G  RA+WR++SSIEQK    G+E     +R+YR K++ +L  +CD +L LL+SHLI  A  AES+VFYL M GDY+RYLAE  TG ++K   +S
Sbjct:   48 YKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDS 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.029e-25
Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+G  RA+WR++SSIEQK    G+E     +++YR K++ +L  +CD +L LL+SHLI  A  AES+VFYL M GDY+RYLAE  TG ++K   +S
Sbjct:   48 YKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVKEYREKVETELRGVCDTVLGLLDSHLIKGAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDS 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14337_ORYSJ (14-3-3-like protein GF14-G OS=Oryza sativa subsp. japonica GN=GF14G PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.029e-25
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAE 339
            +KN+IGA RA+ RII SIE KEE++G E HV    +YR K++ ++ KIC  ++++++ +LIP +S AES VFY  M GDY+RYLAEFKTG E+ E +E
Sbjct:   49 YKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDKYLIPHSSGAESSVFYYKMKGDYYRYLAEFKTGTEKIEVSE 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.262e-25
Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK E  G+E      +DYR KI+ +L  IC  +L+LL+  LIP A++AESKVFYL M GDY+RYLAE  TG ER++  E +
Sbjct:   17 YKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKDYREKIEKELKDICHEVLTLLDKFLIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEES 114          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.975e-25
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS AESKVFYL M GDY+RYLAE   G ++K   E +
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVEQS 145          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK E  G E      R+YR KI+ +L +IC+ +L LLE +LIP+AS AESKVFYL M GDY+RYL+E  +G  ++   E++
Sbjct:   48 YKNVVGARRSSWRVISSIEQKTE--GNEKKQQMAREYREKIEAELQEICNDVLGLLEKYLIPNASQAESKVFYLKMKGDYYRYLSEVASGDSKRTTVENS 145          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS AESKVFYL M GDY+RYLAE   G ++K
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKK 139          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS AESKVFYL M GDY+RYLAE   G ++K
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKK 139          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.999e-24
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS AESKVFYL M GDY+RYLAE   G ++K
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKK 139          
The following BLAST results are available for this feature:
BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433_TOBAC2.790e-2655.0014-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
1433S_HUMAN1.385e-2551.5214-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S... [more]
1433S_MOUSE4.029e-2550.5114-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
14337_ORYSJ4.029e-2553.0614-3-3-like protein GF14-G OS=Oryza sativa subsp. ... [more]
14332_SCHMA5.262e-2556.0014-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
1433Z_CHICK8.975e-2556.0014-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
143B1_DANRE1.999e-2454.0014-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
1433Z_PONAB1.999e-2458.5114-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_HUMAN1.999e-2458.5114-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_BOVIN1.999e-2458.5114-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT
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