CF832204

Overview
NameCF832204
Unique NameCF832204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:240..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.454e-24
Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK E  G+E      ++YR K++ +L +IC  +L LL+ HLIP AS+ ESKVFYL M GDY+RYLAE  TG  R    E +
Sbjct:   50 YKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDS 147          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.818e-24
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+G  RA+WR++SSIEQK     +E     +++YR K++ +L  +CD +L LL++HLI  A  AES+VFYL M GDY+RYLAE  TG ++K   +S
Sbjct:   48 YKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDS 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.818e-24
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERKEAAES 342
            +KNV+G  RA+WR++SSIEQK     +E     +++YR K++ +L  +CD +L LL++HLI  A  AES+VFYL M GDY+RYLAE  TG ++K   +S
Sbjct:   48 YKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDS 146          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS  ESKVFYL M GDY+RYLAE   G ++K
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKK 139          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSAESKVFYLNMSGDYHRYLAEFKTGAERK 327
            +KNV+GA R+SWR++SSIEQK E  G E      R+YR KI+ +L  IC+ +LSLLE  LIP+AS  ESKVFYL M GDY+RYLAE   G ++K
Sbjct:   48 YKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKK 139          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSA--ESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK  + G E  +  +R YR KI+ +L  +C  +LSLL+++LI + S    ESKVFYL M GDY+RYLAE  TG +R    ES+
Sbjct:   49 YKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSA--ESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK  + G E  +  +R YR KI+ +L  +C  +LSLL+++LI + S    ESKVFYL M GDY+RYLAE  TG +R    ES+
Sbjct:   49 YKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSA--ESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK  + G E  +  +R YR KI+ +L  +C  +LSLL+++LI + S    ESKVFYL M GDY+RYLAE  TG +R    ES+
Sbjct:   49 YKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSA--ESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK  + G E  +  +R YR KI+ +L  +C  +LSLL+++LI + S    ESKVFYL M GDY+RYLAE  TG +R    ES+
Sbjct:   49 YKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150          
BLAST of CF832204 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1
Query:   46 HKNVIGAMRASWRIISSIEQKEESRGTEYHVSGIRDYRSKIDNDLSKICDGILSLLESHLIPSASSA--ESKVFYLNMSGDYHRYLAEFKTGAERKEAAEST 345
            +KNV+GA R+SWR+ISSIEQK  + G E  +  +R YR KI+ +L  +C  +LSLL+++LI + S    ESKVFYL M GDY+RYLAE  TG +R    ES+
Sbjct:   49 YKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELGAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150          
The following BLAST results are available for this feature:
BLAST of CF832204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433Z_BOMMO4.454e-2454.0014-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]
1433S_SHEEP5.818e-2448.4814-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_BOVIN5.818e-2448.4814-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
1433Z_RAT7.598e-2457.4514-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_MOUSE7.598e-2457.4514-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433G_RAT7.598e-2451.9614-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB7.598e-2451.9614-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE7.598e-2451.9614-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN7.598e-2451.9614-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]
1433G_CHICK7.598e-2451.9614-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832204 ID=CF832204; Name=CF832204; organism=Citrus sinensis; type=EST; length=346bp
GTTCCTTTGCTACCGTGGAGGAAAGGAACCTTCTCTCACTTGCTTCACAA
GAATGTGATTGGGGCCATGAGGGCTTCATGGAGGATCATCTCTTCCATTG
AGCAGAAGGAGGAGAGCCGGGGAACTGAATACCATGTCTCAGGAATTAGG
GACTACAGGAGCAAAATTGACAATGACCTCAGCAAGATCTGTGATGGGAT
TCTTAGCCTCCTTGAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAATATGAGCGGTGATTACCACAGGTATCTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTT
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