CF832218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 182 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 427 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 182 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 427 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 182 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 427 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 143 EQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 415 + L+ + + +L+V DF A+WCGPC+ +AP L +AK+ V+F+K+DVDE + VA + V AMPT + K G + VVG+ + +++ I Sbjct: 13 DALEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELI 103
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 179 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 415 VV+D WCGPC+ +AP ELA+KL +V+FLK+D + E K +A + + +PTF LK GKIVD+V G+K ++L I Sbjct: 106 VVLDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAI 185
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 182 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 427 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 182 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 427 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 179 VVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 427 V+VDF A WCGPCR +AP + E+A++ + +KV+ DE VA+ + + ++PT M K G+ VD VVG+ K L QT+ KHL Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: THIO1_ANASO (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 179 VVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 427 V+VDF A WCGPCR +AP + E+A++ + +KV+ DE VA+ + + ++PT M K G+ VD VVG+ K L QT+ KHL Sbjct: 23 VLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of CF832218 vs. ExPASy Swiss-Prot
Match: TXND2_MOUSE (Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 80 AEMAAAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAK 421 AE+ EEG V E + E L+ + E +LV VDF+A+WCGPCR + P L+ K +V+FL+VD ++ + + D + +PTF F K + V + G+ +L+++I++ Sbjct: 402 AEIETLEEGLVRVIKDKEEFEEVLKDAGE--KLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 513 The following BLAST results are available for this feature:
BLAST of CF832218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832218 ID=CF832218; Name=CF832218; organism=Citrus sinensis; type=EST; length=651bpback to top |