CF832221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_OSTOS (60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a PE=3 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31 Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M KRTKK GIVGKYGTRYGASLRK +KKME++QHS+Y C FCGK A++R AVGIW C C K AGGAY T +A TVRST+RRLR+ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCKKTVAGGAYVYGTVAAATVRSTVRRLRDLKE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL43_YEAST (60S ribosomal protein L43 OS=Saccharomyces cerevisiae GN=RPL43A PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30 Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M KRTKK GI GKYG RYG+SLR+Q+KK+E+ QH++Y C FCGK VKR A GIW C C K AGGAYT++TA+A TVRSTIRRLRE E Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL43_CANGA (60S ribosomal protein L43 OS=Candida glabrata GN=RPL43 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M KRTKK GI GKYG RYG+SLR+Q+KK+EV QH++Y C FCGK V+R A GIW C C K AGGAYT++TA+A TVRSTIRRLR+ E Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCKKTVAGGAYTVSTAAAATVRSTIRRLRDMVE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_DROME (60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A PE=1 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M KRTKK GIVGKYGTRYGASLRK +KKME++QHSKY C FCGK ++KR VGIW CK C + AGGA+ +T +A +VRS +RRLRE E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVRRLRETKE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_SCHMA (60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.349e-30 Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = -3 Query: 151 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 417 KRTKK GIVGKYG RYGASLRK IKK+E+SQH+KY C FCGK ++KRKA GIW CK C KV AGGAY +T +A T+R+ IRRLR+ E Sbjct: 2 KRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACKKVVAGGAYVCSTTAATTIRAAIRRLRDAHE 90
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL43B_SCHPO (60S ribosomal protein L43-B OS=Schizosaccharomyces pombe GN=rpl43b PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 MTKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K C K AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL43A_SCHPO (60S ribosomal protein L43-A OS=Schizosaccharomyces pombe GN=rpl43a PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 MTKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K C KV AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_MYXGL (60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa GN=rpl37a PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.668e-28 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = -3 Query: 151 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 399 GIVGKYGTRYGASLRK +KK+E++QHSKY C FCGK +KR+AVGIW C C K AGGA+T NT+SAVTV+S IRRLRE + Sbjct: 2 GIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTSSAVTVKSAIRRLREMKD 84
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_PLAF7 (60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7) GN=RPL37A PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.943e-28 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M++RTKK G+ GKYGTRYG+SLRKQIKK+E+ QH+KY C FCGK A KR VGIW CK C + GGA++L T +AV +STI RLR+Q E Sbjct: 1 MSRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCKRKVCGGAWSLTTPAAVAAKSTIIRLRKQKE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37L_HUMAN (Putative 60S ribosomal protein L37a-like OS=Homo sapiens GN=RPL37L PE=5 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21 Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 160 MTKRTKKAG-IVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 423 M K TKK G IV KY T +GASL K +K++E+SQH+KY C FCGK +KR+AV I C C K AG A+T NT SAV V+S IRRL+E Sbjct: 1 MAKCTKKVGGIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGKTKMKRRAVKIRHCNSCMKTVAGSAWTYNTTSAVMVKSAIRRLKE 89 The following BLAST results are available for this feature:
BLAST of CF832221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832221 ID=CF832221; Name=CF832221; organism=Citrus sinensis; type=EST; length=713bpback to top |