CF832221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_META3 (50S ribosomal protein L37Ae OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = -3 Query: 160 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 411 TKK G G++G RYG +R +++ +E+ Q Y C CG +KR + IW CK CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGARYGRKVRVRVRDVEIKQKKAYKCPVCGFMKLKRISTSIWECKKCGAKMAGGAYTPETGAGKVVAKAIRRVIE 90
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_METJA (50S ribosomal protein L37Ae OS=Methanocaldococcus jannaschii GN=rpl37ae PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14 Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = -3 Query: 151 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 423 M TKK G G++G RYG +R +++ +E+ KY C CG +KR + IW C CG AGGAYT T + V IRR+ E+ E Sbjct: 1 MFSHTKKVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCGFPKLKRASTSIWVCGKCGAKIAGGAYTPETGAGKAVMKAIRRIVERKE 91
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_METTH (50S ribosomal protein L37Ae OS=Methanobacterium thermoautotrophicum GN=rpl37ae PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = -3 Query: 166 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 414 RTKK GI G++G RYG ++ +KK+E K+ C C + VKR++ GIW C+ CG V GGAY T T I+R+ Sbjct: 3 RTKKVGITGRFGPRYGRKAKRAVKKIEEEMKRKHVCPSCDRPGVKRESRGIWKCRKCGAVFTGGAYLPVTPMGKTAARNIKRI 85
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_DESK1 (50S ribosomal protein L37Ae OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = -3 Query: 196 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG-KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASA 414 +TK GI G+YGTRYG++LRK+I+ + ++S + C FCG K V R + G+W CK CG AGGAY T SA Sbjct: 3 KTKVVGIAGRYGTRYGSTLRKKIRDILEKRYSPHTCPFCGHKGKVYRLSTGVWACKKCGAKWAGGAYMPKTESA 76
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_METKA (50S ribosomal protein L37Ae OS=Methanopyrus kandleri GN=rpl37ae PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = -3 Query: 157 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQ 414 RTKK G G++G RYG +R+++ ++E Q K+ C C K AVKR GIW C CG GGAY T + VR IR+ E+ Sbjct: 3 RTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAEFTGGAYYPETEAQRIVRRAIRKALEE 88
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_METS3 (50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = -3 Query: 166 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 414 RTKK GI G++G RYG ++ +K +E + + C C + VKR+A GIW C+ CG V GGAY T A + IR + Sbjct: 3 RTKKVGITGRFGARYGRKAKRSVKMIEENMKKNHVCPRCDRPYVKRQAAGIWKCRKCGAVFTGGAYVPETPMAKSAARNIRNV 85
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_PYRFU (50S ribosomal protein L37Ae OS=Pyrococcus furiosus GN=rpl37ae PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = -3 Query: 184 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR 411 TKK G G++G RYG +R+++ +E K+ C CG+ AVKR + GIW C+ CG AGGAY T + VR Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHTCPVCGRKAVKRISTGIWQCQKCGATFAGGAYLPVTPAGKAVR 79
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_PYRAB (50S ribosomal protein L37Ae OS=Pyrococcus abyssi GN=rpl37ae PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = -3 Query: 217 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 411 TKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW CK CG + AGGAY Sbjct: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIFAGGAY 68
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_PYRHO (50S ribosomal protein L37Ae OS=Pyrococcus horikoshii GN=rpl37ae PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = -3 Query: 184 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVR 411 TKK G G++G RYG +R+++ +E K+ C CG+ AVKR + GIW C CG + AGGAY T + R Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCGAIFAGGAYLPVTPAGKVAR 79
BLAST of CF832221 vs. ExPASy Swiss-Prot
Match: RL37A_METMP (50S ribosomal protein L37Ae OS=Methanococcus maripaludis GN=rpl37ae PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = -3 Query: 160 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 411 TKK G G++G+RYG +R +++ +E+ Q+ Y C C +KR IW C+ CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQNKDYKCPVCAFPKLKRAGTSIWVCEKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90 The following BLAST results are available for this feature:
BLAST of CF832221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832221 ID=CF832221; Name=CF832221; organism=Citrus sinensis; type=EST; length=713bpback to top |