CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.540e-65
Identity = 126/228 (55.26%), Postives = 162/228 (71.05%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG-NGGVLANFDVTTPD 681
            QLS  FY +TCPNV + +  V+ +   +D R GA +IRLHFHDCFV+GCD SILLD+  T  +EK  AP N  A GF+++D++K A+E  CP VVSCADIL +A+E  V L+ GPSW V  GR+DS TANR+ AN ++P PF+TL  +   F N G+ D  DLVALSGAHTFGRA+C  F  RL++FN +G PD T+DATFLQ L+ +CPQGG NG    N D++TP+
Sbjct:   23 QLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGT-QTEK-DAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPN 247          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.377e-63
Identity = 119/225 (52.89%), Postives = 155/225 (68.89%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            L P FY  +CP     ++ VL+KA + + R+ ASL+RLHFHDCFV GCDASILLD + TI SEK A PN NS RGF+VID +KA +E+ACP+ VSCADIL +AA  S  LSGGPSW +PLGRRDSRTA+   AN N+P P  T+  L + F+  GLN++ DLV+LSG HT G A+C  F+ RLY+ N   +PD TL+ ++   LR +CP  G    ++  D+ +P
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEE-DLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASP 268          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.033e-63
Identity = 123/227 (54.19%), Postives = 163/227 (71.81%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTT 675
            QL+  FYS++CPN+L+T+   +K A +S+ R+GAS++RL FHDCFV+GCD SILLD T++   E+ AAPN NSARGF VIDN+K+AVE+ACP VVSCADIL IAA  SV   GGP+W V +GRRD+RTA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+  G   G LA  DVTT
Sbjct:   29 QLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCTNFRARIYNETN-------INAAFATTRQRTCPRASGSGDGNLAPLDVTT 247          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.473e-61
Identity = 116/224 (51.79%), Postives = 153/224 (68.30%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTT 675
            L P FY S+CP     +  V+ KAF  + R+ ASL+RLHFHDCFV GCD S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L+GGPSW VPLGRRDS TA+RA  N++LP P +  D +   F N GLN   DLVALSG+HT G ++C  FR RLY+ + +G PD TL+ ++   LR+ CP+ G    L+  D+ +
Sbjct:   35 LFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLN-LTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINS 257          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.104e-60
Identity = 115/225 (51.11%), Postives = 151/225 (67.11%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            L P FY  +CP     +  ++ KAF  D R+ ASL+RLHFHDCFV GCDASILLDS+ TI SEK + PN NSARGFE+I+ +K A+E+ CP  VSCADIL +AA  S  ++GGPSW VPLGRRD+R A+ + +N ++P P +T   + + F+  GL D +DLV+LSG+HT G ++C  FR RLY+ +  GKPD TL   +   LR+ CP+ G    L   D  TP
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGL-DLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATP 256          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.442e-60
Identity = 111/223 (49.78%), Postives = 154/223 (69.06%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDV 669
            +L P +Y+ +CP V   +  V+ KA + + R+ ASL+RLHFHDCFV GCD S+LLDS+  + +EK + PN+ SARGF+V+D +KA +E+ CP  VSCAD+LT+AA  S  L+GGPSW VPLGRRDSR+A+ + +N N+P P +T   + S F   GL D  DLVALSG+HT G ++C  FR RLY+ +  G PD TL+ +F   LR+ CP+ G   +L+  D+
Sbjct:   29 KLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGL-DITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDI 250          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.883e-60
Identity = 122/227 (53.74%), Postives = 150/227 (66.08%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLS  FY++ CPN L+TI   +  A + + R+GASL+RLHFHDCFV GCDAS+LLD T+    EK A PN NS RGFEVID +K+ VE  CP VVSCADIL +AA  SV   GG SW V LGRRDS TA+ + AN +LP PF  L  L S+F N G   K +LV LSGAHT G+AQC  FR R+Y+ +N       +D T+ + L+  CP  G    L+ FDVTTP+
Sbjct:   23 QLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCTAFRTRIYNESN-------IDPTYAKSLQANCPSVGGDTNLSPFDVTTPN 241          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.082e-59
Identity = 111/224 (49.55%), Postives = 153/224 (68.30%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTT 675
            L P FY S+CP     +  V+ KA + + R+ ASL+RLHFHDCFV GCD S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L+GGPSW VPLGRRDS +A+ + +N N+P P +T + + + F N GL D  D+VALSG+HT G ++C  FR RLY+ +  G PD TL+ ++   LR+ CP+ G    L+  D+ +
Sbjct:   36 LFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGL-DLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINS 258          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.639e-59
Identity = 125/230 (54.35%), Postives = 160/230 (69.57%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDST--NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN-NTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QL+  FYS+TCPNV      ++++A  +D+R+ A ++RLHFHDCFV+GCD S+LLD+   + ++ EK A  N  S  GFEVID++K A+E  CP VVSCADIL IAAE SVAL+GGPS  V LGRRD RTA RA A   LP   D+L+ L S F +V   D  DLVALSGAHTFGR QC     RL++F+ N+G+ DP+++  FLQ LR+ CPQGG+    AN D T+PD
Sbjct:   24 QLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKF-SVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPD 252          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.927e-58
Identity = 119/228 (52.19%), Postives = 151/228 (66.23%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ-NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLSP FY  +C N L+ I   ++ A + + R+ ASLIR+HFHDCFV GCDASILL+ T+TI+SE+ A PN  S RGFEVID  K+ VE+ CP +VSCADI+ +AA  +    GGP WAV +GRRDS  A +ALAN   LPG  DTLD+L   F   GLN + DLVALSGAHT G++QC  FR RLY+ ++       +DA F    ++ CP  G  G LA  D+ TP+
Sbjct:   25 QLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTR-DLVALSGAHTIGQSQCFLFRDRLYENSS------DIDAGFASTRKRRCPTVGGDGNLAALDLVTPN 245          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERX_TOBAC2.540e-6555.26Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER9_ARATH2.377e-6352.89Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER52_ARATH9.033e-6354.19Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER14_ARATH6.473e-6151.79Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER72_ARATH1.104e-6051.11Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER49_ARATH1.442e-6049.78Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER1_ARAHY1.883e-6053.74Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER15_ARATH2.082e-5949.55Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER58_ARATH4.639e-5954.35Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER5_ARATH3.927e-5852.19Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
back to top