CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 1.143e-57
Identity = 113/216 (52.31%), Postives = 154/216 (71.30%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG 648
            QL+  FYS++CPN+L+T+   +K A SS  R+GAS++RL FHDCFV+GCD SILLD T++   E+ A PN NSARGF VI+++K+AVE+ACP VVSCADIL IAA  SV   GGP+W V +GRRD++TA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+    G
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCVNFRARVYNETN-------INAAFATLRQRSCPRAAGSG 208          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.143e-57
Identity = 119/222 (53.60%), Postives = 148/222 (66.67%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            FY  +CP+V N +  V+++A  SD R GA LIRLHFHDCFV+GCD S+LL+    + SE  AAP N +  GF +++N+KAAVE+ACP VVSCADIL IA+  SV L+GGP W V LGRRDSR AN   A   LP PF+ + +LK  F  V L D  DLVALSGAHTFG+++CQFF  RL    N   PD TL+  + QQLR+ C  G +     N D TTP+
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSE-LAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRD--TFVNLDPTTPN 215          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 7.407e-57
Identity = 109/225 (48.44%), Postives = 147/225 (65.33%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            LSP FY ++CPN    +   +  A+ +D R+ AS++RLHFHDCFV+GCDAS+LLDS+ T++SEK +  N +SARGFEVID +K+A+E  CP  VSCAD+L + A  S+ + GGPSW V LGRRD+R A+   + +N+P P  TL  + + F   GL D  DLVAL G+HT G ++C  FR RLY+      PD TL+  +   L++ CP  GN   L N D  TP
Sbjct:   41 LSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTP 264          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.673e-57
Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTP 678
            QLS  FYS TCP V +T+   ++ A S + R+GASL+RL FHDCFV+GCDAS+LLD T++   E+ A PN NS RG  VIDN+K+ VE  CP VVSCADI+ IAA  SV + GGP W V LGRRDS+TA+ + AN N+P P  +L  L S F+  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D++F +  +  CP     G   LA  D+ TP
Sbjct:   26 QLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTR-DMVALSGAHTIGQARCTSFRARIYNETN-------IDSSFAKTRQASCPSASGSGDNNLAPLDLQTP 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.676e-56
Identity = 119/229 (51.97%), Postives = 146/229 (63.76%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPD 681
            QLS  FY ++CPN L+TI   +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+
Sbjct:   24 QLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPN 239          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.676e-56
Identity = 119/229 (51.97%), Postives = 146/229 (63.76%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPD 681
            QLS  FY ++CPN L+TI   +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+
Sbjct:   24 QLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPN 239          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.801e-56
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDAT--FLQQLRKLCP 630
            FY  +CP +   +   + +AF  D RI ASL+RLHFHDCFV+GCD SILL+ +     EK A PN NS RGFEVI+++K+ +E +CP  VSCADI+ +AA  +V L+GGP W VPLGRRDS TA+   AN NLP PF+ L+ + + F  +GL D  D+V LSGAHT G AQC   + RL++F  +G+PDP L A+   L +L+  CP
Sbjct:   52 FYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGL-DLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCP 257          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.397e-55
Identity = 116/230 (50.43%), Postives = 149/230 (64.78%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPD 681
            QL+  FY  +CP++   +  V+K+A + + R+GASL+RL FHDCFV+GCD S+LLD T +   EK + P+NNS RGFEVID +K  VE+ CP +VSCADIL I A  SV L GGP W+V LGRRDS TAN A AN   +P P  TL  L + F+  GL+ + D+VALSGAHT GRAQC  FR R+Y+ +N       +D +F    R+ CP   G      AN DV +PD
Sbjct:   20 QLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTR-DMVALSGAHTIGRAQCVTFRNRIYNASN-------IDTSFAISKRRNCPATSGSGDNKKANLDVRSPD 241          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.824e-55
Identity = 121/228 (53.07%), Postives = 144/228 (63.16%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNG-GVLANFDVTTP 678
            QLSP FYS +CP  L TI   +  A + + R+GASL+RLHFHDCFV GCD S+LL+ T T   E+ A PN  S RGF V+DN+KA VE  CP VVSCADIL +AA  SV   GGPSW V LGRRDS TA+ ALAN +LP P   L  L ++F    L+ + DLVALSGAHT G AQC+ FR  +Y+       D  ++A F    R  CP   GNG G LA  D  TP
Sbjct:   26 QLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIGLAQCKNFRAHIYN-------DTNVNAAFATLRRANCPAAAGNGDGNLAPLDTATP 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.112e-55
Identity = 115/227 (50.66%), Postives = 150/227 (66.08%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLSP FY  TC N L+TI   ++ A S + R+ ASLIRLHFHDCFV+GCDAS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+
Sbjct:   20 QLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSS------DIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPN 239          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERP7_BRARA1.143e-5752.31Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER2_CUCSA1.143e-5753.60Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER36_ARATH7.407e-5748.44Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER4_VITVI9.673e-5750.44Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER2_ORYSJ3.676e-5651.97Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI3.676e-5651.97Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER10_ARATH4.801e-5651.21Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER67_ARATH1.397e-5550.43Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER70_MAIZE1.824e-5553.07Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER4_ARATH3.112e-5550.66Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
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