CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.714e-50
Identity = 113/227 (49.78%), Postives = 145/227 (63.88%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLS  FY +TCP  L+TI   ++ + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P     F + L + CP  GN   L   D+ TP+
Sbjct:   31 QLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEP----NFNRSLSQACPPTGNDATLRPLDLVTPN 246          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.714e-50
Identity = 113/227 (49.78%), Postives = 145/227 (63.88%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLS  FY +TCP  L+TI   ++ + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P     F + L + CP  GN   L   D+ TP+
Sbjct:   31 QLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEP----NFNRSLSQACPPTGNDATLRPLDLVTPN 246          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.954e-49
Identity = 106/226 (46.90%), Postives = 139/226 (61.50%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            QL   FYS +CPN    + +++++ F+ D  I A+L R+HFHDCFV GCDAS+L+D T +  SEK A PN  S RGFE+ID +K A+E  CP  VSC+DI+T+A   +V L GGPS+ VP GRRD   +N   AN+ LP PF +++ + S F N G+N   D VAL GAHT G A C  F  R+ +F  TG PDP++D T   +LR  C   G    L      TP
Sbjct:   22 QLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTP 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.332e-49
Identity = 99/207 (47.83%), Postives = 129/207 (62.32%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 636
            FY ++C      + D ++K F  D  +   L+R+HFHDCFV GCD S+L+DST +  +EK +  NN S RGFEVID+ KA +E  C  VVSCADI+  AA  SV ++GG  + VP GRRD R +  + A+ NLP P  T+D+L   F N GL    ++V LSGAHT GR+ C  F  RLY+FN T   DPTLD  +   L+  CPQG
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQG 270          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.352e-49
Identity = 100/206 (48.54%), Postives = 129/206 (62.62%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ 633
            FYS TCP   + +   ++   +SD  + A ++R+HFHDCFV GCD SIL+    T +   FA   N   RG+E+ID+ K  +E ACP VVSCADIL +AA  SV LSGG SW VP GRRD R  ++A    NLP P D++D  K  F   GLN + DLV L G HT G ++CQFF  RL++FN T   DP +D +F+  L+ LCPQ
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT-EKTAFA---NLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGR-VSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQ-DLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQ 235          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.160e-48
Identity = 99/209 (47.37%), Postives = 133/209 (63.64%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLC 627
            QL   FYS +CP     + +++++ F     + A+L+R+HFHDCFV GCDAS+L+DSTN   SEK A PN  S R F++ID +KA +E ACP  VSCADI+T+A   SVAL+GGPS+++P GRRD R +N    +  LPGP  ++    S F N G+N   D VAL GAHT G+  C  F  R+  F  TG+PDP++D   +  LR  C
Sbjct:   23 QLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNG-SVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTC 224          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48
Identity = 103/217 (47.47%), Postives = 141/217 (64.98%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD 666
            FYS+TCP   + +  V+  A  SD  + A L+RLHFHDCFV+GCD SIL++  N   SEK A   +   RGFE+++ +KA +E ACP VVSC+DI+ +AA  +++L+ GP++ VP GRRD R +N +LA +++P   D+++ LK+ F   GLN K DLV LS AHT G   C F   RLYDF   G+PDPT++ TFL +L   CPQ G+  V    D
Sbjct:   30 FYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVN--NGAISEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPID 241          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 108/228 (47.37%), Postives = 141/228 (61.84%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            QLS  FY  +CPN L+TI   +  A   + R+GASL+RLHFHDCFV GCDAS+LL+ T+    E+   PN   + RGF V++++KA VE  CP +VSCADIL +AA   V   GGPSW V LGRRDS TA+ A    +LP P  +L +L S++    LN   D+VALSGAHT G+AQC  F   +Y+       D  +++ F   LR  CP+ G+   LA  D TTP+
Sbjct:   30 QLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLN-PTDMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRAGS-TALAPLDTTTPN 244          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.829e-47
Identity = 94/206 (45.63%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 618
            QL   FY  TCP     + DV+ +  ++   + A LIR+HFHDCFV GCD SIL+++T++    +  AP N + RGF+ ID +K+A+E  CP +VSCADI+T+A   S+   GGP+W VP GRRD R +N A A  N+P PF     L + F N GL+ K DLV LSGAHT G + C  F  RL++F   G  DP+LD+ +   L+
Sbjct:   24 QLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVK-DLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLK 228          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.829e-47
Identity = 98/204 (48.04%), Postives = 126/204 (61.76%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLC 627
            FYS TCP +   +  V+  A +    +GA L+R+ FHDCFV GCD S+LLD  N    EK A PN  S RGF +ID+ KAA+E+ CP +VSC+DIL + A  ++    GPSW V  GRRD R +N  +   NLP PFD + +L S FR+ GLN+K DLV LSG HT G   C     RLY+F   G  DP+LD+ +  +LRK C
Sbjct:   30 FYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKC 228          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_ZINEL6.714e-5049.78Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL6.714e-5049.78Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER28_ARATH1.954e-4946.90Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER5_VITVI3.332e-4947.83Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER2_ARAHY4.352e-4948.54Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER57_ARATH2.160e-4847.37Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER43_ARATH3.684e-4847.47Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER66_MAIZE6.285e-4847.37Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER39_ARATH1.829e-4745.63Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER27_ARATH1.829e-4748.04Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
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