CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.074e-47
Identity = 105/222 (47.30%), Postives = 136/222 (61.26%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            FY + C NV + +  V++    S       ++R+HFHDCFV GCD S+LL + NT  SE+ A PN  S RGFEVI+  KA +E+ACPR VSCADILT+AA  +V L+GG  W VPLGR D R +    ++ NLPGP D++ + K  F    LN  LDLV L G HT G A C   RGR  +FN TG+PDP++D +F+  +   CPQ  NGG     D  + D
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL-AGNT--SERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQ--ASDVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ--NGGTRVELDEGSVD 253          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.074e-47
Identity = 105/227 (46.26%), Postives = 138/227 (60.79%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            QLS  FY ++CP+ ++TI   +  A +   R+GASL+RLHFHDCF+ GCDASILL+ T+    E+   PN   + R F+V++++KA VE ACP VVSCADIL +AA   V   GGPSW V LGRRDS T +      +LP P  +L  L +++    L D  D+VALSGAHT G+AQC  F G +Y+       D  ++A F   L+  CP  G G  LA  D  TP
Sbjct:   30 QLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKANCPMSG-GSSLAPLDTMTP 243          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.548e-46
Identity = 96/223 (43.05%), Postives = 137/223 (61.43%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFD 666
            QL   FY+++CPN    + D +    S+   + A+LIR+HFHDCFV GCD S+L++ST+  ++E+ A PN  + RGF  ID +K+ +E  CP +VSCADI+ +A+  +V  +GGP+W+VP GRRD R +N A A  N+P P   +  L++ F N GL D  DLV LSGAHT G + C  F  RLY+F   G  DP LD+ +   L+ + CP   +   +   D
Sbjct:   25 QLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMD 244          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.640e-46
Identity = 92/205 (44.88%), Postives = 127/205 (61.95%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP 630
            +Y S CP     +  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+ER CP ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP PF  +  LK +F N GLN K DLV LSG HT G + C     RLY+F   G  DP+++ +++++L++ CP
Sbjct:   30 YYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP 231          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46
Identity = 92/206 (44.66%), Postives = 129/206 (62.62%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 618
            QL   FY+ +CPN    I D ++    +   + A LIR+HFHDCFV GCD S+L++ST+   + +  AP N + RGF  ++ +KA +E+ CP+ VSCADI+ + A  +V  +GGPSW+VP GRRD R +N+  A  N+P P      L+  F+N GLN K DLV LSGAHT G + C     RLY+F+ T K DP+LD+ +   L+
Sbjct:   28 QLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTS--GNAERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLK-DLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLK 230          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 104/219 (47.49%), Postives = 132/219 (60.27%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVAL-SGAHTFGRAQCQFFRGRLYDFNNTGK-PDPTLDATFLQQLRKLCPQGGNGGVLANFD 666
            FYS+TCPN    +   +   F SD ++   L+R+H HDCFV GCD S+LL   N   SE+ A  N N   GFEVID+ K  +E ACP VVSCADIL +AA  SV+L+ G SW VP GRRD R +  +  N NLP P D+L   +  F    LN + DLV L  G HT G A C F   R+  FN++G   DPT+D TF+ QL++LCPQ G+G    + D
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTR-DLVTLVGGGHTIGTAACGFITNRI--FNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDLD 239          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46
Identity = 107/224 (47.77%), Postives = 135/224 (60.27%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN--NTGKPDP-TLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            FY  +CP     +   ++ A   D R+ ASL+RL FHDCFV GCDAS+LLD+   + SEK A PN NS RGFEVID +K  +E ACP  VSC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P  +LD L  +F+  GLN + DL+ALSGAHT G+A+C  F+ R+   N   T   D     +TF + L   C        L+  D+ TP
Sbjct:   34 FYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTP 256          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.235e-45
Identity = 103/228 (45.18%), Postives = 135/228 (59.21%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            LS  FY   CP V N I   LKK F  DI + A+++R+HFHDCFV GC+AS+LL  + +   E+ + PN     + F VI+N++A V++ C +VVSC+DIL +AA  SV LSGGP +AVPLGRRDS   A++     NLP PF    +L + F N  LN   DLVALSG HT G A C  F  RLY        DPT++  F   L++ CP   +     N D+ +PD
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLYP-----NQDPTMNQFFANSLKRTCPTANSSNTQVN-DIRSPD 264          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 3.813e-45
Identity = 90/205 (43.90%), Postives = 128/205 (62.44%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP 630
            +Y  +CP     I   ++  ++    +   +IRL FHDCF++GCDAS+LLD+     SEK A+PN  S +GF+VID +K+ +E  CP VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+  CP
Sbjct:   72 YYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCP 274          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.109e-44
Identity = 97/215 (45.12%), Postives = 131/215 (60.93%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG 648
            L   +Y  +CP     IL+ ++ A   D ++ A L+R+ FHDCF+ GCDASILLDST +  +EK   PN  S R F VI++ K  +E+ACPR VSCAD++ IAA   V LSGGP W+V  GR+D  T +RA   +NLP P   + +L  SF   GL+ K D+V LSG HT G + C  F  RL +F+     DP+++  F Q L+K CP+  N G
Sbjct:   26 LDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRG 237          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER69_ARATH4.074e-4747.30Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER42_MAIZE4.074e-4746.26Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER3_ARATH1.548e-4643.05Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER1_ARATH2.640e-4644.88Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER30_ARATH3.448e-4644.66Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER62_ARATH4.504e-4647.49Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER20_ARATH7.682e-4647.77Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER12_ARATH2.235e-4545.18Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER48_ARATH3.813e-4543.90Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER66_ARATH1.109e-4445.12Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
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