CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.732e-43
Identity = 96/222 (43.24%), Postives = 130/222 (58.56%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            +Y S C NV + +  V++  + ++      ++R+HFHDCFV GCDAS+LL   N   SE+ A PN  S RGF VI+  K  +E ACPR VSCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP D++   K  F    LN + DLV L+  HT G A C  FR R ++++NTG PDPT+  +F+  ++  CP  G+       D  + D
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGD 252          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.569e-43
Identity = 99/226 (43.81%), Postives = 137/226 (60.62%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG--PSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF--RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD 666
            QL   FYS  C NV N +  V+ +AF  D  I  ++IRL+FHDCF +GCDAS+LLD +N   SEK A+P N S RG+EVID++K+AVE+ C RVVSCADI+ +A    V L+ G    + +P GR D + ++  L   +LP P  T+ E  + F  R + LN   D+V L G HT G   C F   RLY+F NT KPDP++D   +++L   CP+  +   + + D
Sbjct:   27 QLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASP-NLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLV--DLPSPKMTVAETAAKFDQRKLSLN---DMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLD 243          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 106/223 (47.53%), Postives = 136/223 (60.99%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD 666
            QL   FYS TCP+  + + DV+++A ++D    A L+RL FHDCFV+GCD SIL+      D E+FAA N   A GF+VID  K+ +ER CP VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+  V    D
Sbjct:   23 QLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLD 235          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.771e-42
Identity = 90/204 (44.12%), Postives = 119/204 (58.33%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLC 627
            FY   CP     +   + +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + PN  + RGFE+IDN+KAA+E+ CP +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP PF+ +  L + F++ GL DK DLV LSG HT G   C     RLY+F   G  DP LD  +  +LR  C
Sbjct:   36 FYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKC 236          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.021e-42
Identity = 98/227 (43.17%), Postives = 129/227 (56.83%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDF---NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD 666
            QL   FYS++CP+V   +   + +A  +   +   L+R+HFHDCFV GCD S+LLDS     +EK A PN  + RGF  ++ +KAAVE+ACP  VSCAD+L + A  +V LS GP WAVPLGRRD R    ++AN+   LP P     EL   F    L D  DLV LS  HT G + C  F  RLY+F   +N    DPTL+  ++ +LR  C    +   L   D
Sbjct:   23 QLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRV---SIANETDQLPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMD 244          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.730e-42
Identity = 95/229 (41.48%), Postives = 133/229 (58.08%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 678
            QL   FY+ TCPNV   + + ++K          + +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    C   VSCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P   L++L + F   GL+   D++ALSGAHT G A C     RLY+FN T   DPT++  ++ +L+  CPQ  +  V  N D  TP
Sbjct:   26 QLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTP 253          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.730e-42
Identity = 98/214 (45.79%), Postives = 128/214 (59.81%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLD-STNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN---TGKPDPTLDATFLQQLRKLCP 630
            QL   FY ++CPN    +   +  AF+ D  I A LIRLHFHDCFV GCD S+LL  +     +E+ A PNN S RGF+VID  K AVE++CPR VSCADI+  AA  S++L+G  S+ VP GRRD R +N A    +LP P  T   L   F+   L+ + D+V LSGAHT GR+ C  F  R+++ +    T   D  L  ++ Q LR LCP
Sbjct:   34 QLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCP 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.718e-41
Identity = 98/232 (42.24%), Postives = 132/232 (56.90%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFA---APNNNSAR--GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTP 678
            +LS  +YS  CP +   +  V  + F        + IRL FHDCFV+GCD SIL+++     S+K A   A  N   R  GF+ I   KA VE  CP +VSC+DIL IAA   + L+GGP + V  GR D + +       N+P    T+D+L   F + GL  + +LV LSG+HT G A C+ F GRLYD+  T +PDP+LD   L++LR  CP  GG+ GV+   D TTP
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKK--GSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTP 269          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.693e-40
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 681
            LS  +Y  +CP     + + +  A  +D  + A LIR+ FHDCF++GCDASILLDST    +EK  +P N S RG+E+ID+ K  +E  CP VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP PF    +L  +F   G   + D+VALSGAHT G A+C  F+ RL        PD +LD+TF   L K C  G N      FD T  D
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLSKTCSAGDNAE--QPFDATRND 240          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.227e-40
Identity = 89/203 (43.84%), Postives = 122/203 (60.10%), Query Frame = 1
Query:   22 SSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP 630
            ++TC +    I   ++K + +D  I   L+RL + DC V+GCD SILL   N   SE+  AP N    GF +ID +K  +E  CP VVSCADIL +A   +V ++G PS+ V  GRRD  T N    +  LP P  ++DE  + F++ GL D LD+  L GAH+ G+  C +   RLY+F NTGKPDPT++ T + QLR LCP
Sbjct:   43 TNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCP 238          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER70_ARATH2.732e-4343.24Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER60_ARATH3.569e-4343.81Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER13_ARATH7.950e-4347.53Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER56_ARATH1.771e-4244.12Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER1_ORYSJ3.021e-4243.17Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER51_ARATH6.730e-4241.48Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER1_MAIZE6.730e-4245.79Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER19_ARATH9.718e-4142.24Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER47_ARATH3.693e-4042.48Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER61_ARATH8.227e-4043.84Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
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