CF832246

Overview
NameCF832246
Unique NameCF832246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:111..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36
Identity = 85/166 (51.20%), Postives = 105/166 (63.25%), Query Frame = 1
Query:   40 VLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 531
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP PFD L      F +     + ++VAL+GAHT G A+C
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARC 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 88/226 (38.94%), Postives = 122/226 (53.98%), Query Frame = 1
Query:    4 LSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY--DFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTT 675
            LS  FY+S+C      + + ++ A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  CP  VSCADI+ +AA  +V  +GGP   +P GRRD + +  A    N+     TLD++  +F + GL+ + DLV LSGAHT G + C  F GR       N    D +LD ++ + L   C    +  +  + D  T
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPET 249          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 83/166 (50.00%), Postives = 105/166 (63.25%), Query Frame = 1
Query:   40 VLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 531
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PNNNS RGFEVI   K +V  +CP + VSCADIL IAA  S+A  GG ++ V LGR D+ TAN + A   LP P D L      F +     + ++VAL+GAHT G A+C
Sbjct:   81 VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARC 245          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.577e-35
Identity = 90/226 (39.82%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG---NGGVLANFDVTTP 678
            FY ++CP   + +  ++ K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+     P W V  GR D R +    A ++LP        L+  F    L D +DLVALSGAHT G A C  F  RL +F   G  DP+L+ ++   L+  C       N   +   D T P
Sbjct:   50 FYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGP 273          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.810e-34
Identity = 80/165 (48.48%), Postives = 105/165 (63.64%), Query Frame = 1
Query:   40 VLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 531
            V + + +V+  A +++ R+GASLIRL FHDCFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+   P + VSCADIL+IAA  S     G ++ V LGR+D+RTAN   AN  L GP + L    + F   G N   ++VAL G+HT G A+C
Sbjct:   71 VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNG-TEMVALLGSHTIGFARC 234          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.810e-34
Identity = 84/224 (37.50%), Postives = 126/224 (56.25%), Query Frame = 1
Query:   16 FYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPD 681
            FYS +CP  L+ I + +     S     A+ +RL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+V+   K A+E ACP  VSC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP P   + +L   F + G + + ++VALSGAHT G + C+ F  R+   N+TG      +  F   L+K C    N   ++ F DV TP+
Sbjct:   36 FYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG-----YNPRFAVALKKACSNSKNDPTISVFNDVMTPN 253          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.151e-33
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 1
Query:   40 VLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQC 531
            V + + +++  A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +       ++ + LGR+D+RTAN   AN  LP PFD L    + F + G N + ++V L+GAHT G ++C
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC 235          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33
Identity = 88/189 (46.56%), Postives = 117/189 (61.90%), Query Frame = 1
Query:    1 QLSPFF------YSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDS-EKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVALSGGP-SWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 540
            Q SP++      Y  TCP     +   ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T    + EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA + S  LS G  S+ +P GR D   +N + + + L  P   L +L SSF   G++ + DLV LSGAHT GR+ C  F
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSF 215          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.963e-33
Identity = 79/209 (37.80%), Postives = 115/209 (55.02%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLC 627
            QL   FY  TCP   + +  V+   +  +  + A+L+R+ FHDC V GCDAS+L+D T    SEK +   N   RGFE+ID  K  +E  CP+ VSCADI+TIA   S+AL+GGP + V  GRRD   +N   ++  L GP  ++     +F+++G N    +  + G HT G A C  F+ R+         DP +D+    +L+K C
Sbjct:   21 QLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKKSC 218          
BLAST of CF832246 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33
Identity = 87/229 (37.99%), Postives = 130/229 (56.77%), Query Frame = 1
Query:    1 QLSPFFYSSTCPNVLNTILDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPD 681
            +L+  FYS TCP  L+ I D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E ACP  VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP P   + ++   F + G   + ++VALSGAH+ G + C+ F GR+   NNTG      +  F   L+K C        ++ F D+ TP+
Sbjct:   20 RLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTG-----YNPRFAVALKKACANYPKDPTISVFNDIMTPN 241          
The following BLAST results are available for this feature:
BLAST of CF832246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERX_SOLTU7.207e-3651.20Suberization-associated anionic peroxidase OS=Sola... [more]
PER46_ARATH1.606e-3538.94Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER2_SOLLC2.097e-3550.00Suberization-associated anionic peroxidase 2 OS=So... [more]
PER24_ARATH3.577e-3539.82Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PERA_IPOBA8.810e-3448.48Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER63_ARATH8.810e-3437.50Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PERN_IPOBA1.151e-3344.85Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_MAIZE1.503e-3346.56Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER8_ARATH1.963e-3337.80Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER31_ARATH2.563e-3337.99Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832246 ID=CF832246; Name=CF832246; organism=Citrus sinensis; type=EST; length=683bp
CAACTTTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTATTGAACAC
TATCCTTGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTG
CCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGAT
GCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGC
TGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGA
AAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATT
CTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATG
GGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTG
CAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATCT
AGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCTC
CGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGAT
TATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAACC
TTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGCGT
TCTTGCTAATTTTGATGTCACGACACCTGATGT
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