CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15 Identity = 46/131 (35.11%), Postives = 78/131 (59.54%), Query Frame = -3 Query: 455 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQN 844 +G+LYE+S++S ++ ++RY++ + D + + + E L+ ++ +Q S R +LGE L L KEL+ +E +LE + IRSKKN+LLF I +QK+E L N N +L+ K+ E E+ + N Sbjct: 51 KGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEKEKNN 180
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.499e-15 Identity = 44/132 (33.33%), Postives = 81/132 (61.36%), Query Frame = -3 Query: 446 GRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNL 841 G+LY+++++S+KS IDRY K+ + + + +F+Q+EAA LR ++ +Q ++R M+GE L+GL+ EL ++E ++E + IR +K +LL EI+ + ++ +H N L K+ Q+N+ L Sbjct: 52 GKLYDFASSSMKSVIDRYNKSKIEQQQLLNPA-SEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIH--QENVEL 180
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 53/173 (30.64%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 332 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAEN-ERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPTNHYPRQDQM 844 RG+LYE+ + S + T++RY++ + + T + YQ E KL+ ++ +Q S+RN+LGE L L+ KEL+ +E +L+K + +IRS K + + ++ +QK+E L SN+ L+ K+ E+ + N ++ Q G + + P + Q+ + T QDQM Sbjct: 51 RGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQ-EYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCASFRPNWDVRQPGDGF--FEPLPLPCNNNLQIGYNEAT-----QDQM 215
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 46/149 (30.87%), Postives = 84/149 (56.38%), Query Frame = -3 Query: 407 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERG--QQNMNLMQGGSSYEIIQSQ 844 +G+L+EYS +S ++ ++RY + + ++ + E AKL+ ++ ++ + RN +GE L L+ KEL+++E +L I IRS+KN+ +F I +QK++ L + N L KI E E+ Q + L+Q ++ I+Q Q Sbjct: 51 KGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQCSNNSSILQPQ 199
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 1.002e-14 Identity = 51/185 (27.57%), Postives = 99/185 (53.51%), Query Frame = -3 Query: 323 RGRLYEYSNNS-VKSTIDRYKKAT-ADTSNTGSICEANAQF-YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE---RGQQNMNLMQGGSSYEIIQSQPFDSRSYFQV-----NALQPTNHYPRQDQMALQ 844 +G+L+EYS+ S ++ ++RY++ + A+ NAQ + E ++L+ +I ++ + R+ LGE L ++ K+L+N+E +LE + IRS+KN+L+ + ++Q++E ++ N +L +I E E R +Q S ++ Q QPF + + L Y +DQ A++ Sbjct: 51 KGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMR 235
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14 Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = -3 Query: 485 RGRLYEYSNN-SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAK 844 RGRLYE+++ S++ TIDRYK T D N +I + + Q + + L ++ + S R +LGE+L G + +EL+ +E +LEK + +IR KK ELL +I ++++E L N+ LR K Sbjct: 51 RGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14 Identity = 47/145 (32.41%), Postives = 87/145 (60.00%), Query Frame = -3 Query: 407 GRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQ 841 GRLY++S++S+KS I+RY++A + + + A+F+Q+E LR Q+ N+ ++NR +LGE +S ++L+ ++ ++E + IR+KK++LL EI + ++ + N LR K N Q+N+ L + +S E S+ Sbjct: 52 GRLYDFSSSSMKSIIERYQEAGEEHCRLLNPM-SEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKF--NIAHQRNIELHKKLNSGESTSSE 193
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = -3 Query: 347 RGRLYEYSNNSVKSTI----DRYKKA-----TADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPT---NHYP 844 +G+LYEY+ +S I +RY A +A++ G+ C E KL+ ++ +Q ++++GE L LN KEL+ +E +LE + IRS+K++L+ I +Q++E L N++L+ ++ E ++ Q+ ++ Q Q S S F + PT ++YP Sbjct: 51 KGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCH--------EYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQ------VQWDQTQPQTSSSSSSFMMREALPTTNISNYP 214
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = -3 Query: 485 RGRLYEYSNN-SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAK 844 RGRLYE+++ S++ TIDRYK T D N +I + + Q + + L ++ + S R +LGE+L G + +EL+ +E +LEK + IR KK ELL +I ++++E L N+ LR K Sbjct: 51 RGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 42/130 (32.31%), Postives = 77/130 (59.23%), Query Frame = -3 Query: 458 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQ 844 RG+LYE+ S+ S+ T+++Y+K + + +I Q QQE KL+ ++ +Q S RN+LGE L L KEL+ +E +L+ + +IRS + + + ++ +Q+RE L +N+ L+ + E+ + Q Sbjct: 51 RGKLYEFCSSTSMLKTLEKYQKCNFGSPES-TIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQ 179 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |