CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 41/138 (29.71%), Postives = 78/138 (56.52%), Query Frame = -3 Query: 431 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGS 844 RG+LYE+ + + T++RY+ + ++ + +Y E +KL+ + +Q + R++LGE L L+ KEL+ +E +LE +S+ R +K +L+ ++E ++++E L N+ L+ K+ E E N MQ S Sbjct: 51 RGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYH-EMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL-EVEGSTSNYRAMQQAS 186
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 49/178 (27.53%), Postives = 91/178 (51.12%), Query Frame = -3 Query: 347 RGRLYEYSNNSVKSTI----DRYKKA-----TADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPT---NHYP 844 +G+LY+Y+ +S I +RY A +A++ G+ C E KL+ ++ +Q ++++GE L LN KEL+ +E +LE + IRS+K++L+ I +Q++E L N++L+ ++ E ++ Q+ ++ Q Q S S F + PT ++YP Sbjct: 51 KGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCH--------EYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQ------VQWDQTQPQTSSSSSSFMMREALPTTNISNYP 214
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 42/133 (31.58%), Postives = 77/133 (57.89%), Query Frame = -3 Query: 455 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER--GQQN 844 +G+L+EY+N+S ++ ++RY++ + + + E AKL+ ++ +Q + ++ +GE L LN KEL+N+E +L+ + IRS+KN+L+ I +QK++ L N L K+ E E+ QQN Sbjct: 51 KGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQN 183
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 40/120 (33.33%), Postives = 74/120 (61.67%), Query Frame = -3 Query: 485 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAK 844 RG+LYE+ + ++STI+RY + + S + + E Q + QE KL+ + ++ +NRN+LGE L + KEL+ +E +LE ++ R +K +++ E+E ++K+E L + N+ L+ K Sbjct: 51 RGKLYEFGSVGIESTIERYNRCY-NCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIK 169
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 48/172 (27.91%), Postives = 96/172 (55.81%), Query Frame = -3 Query: 350 RLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQ--------GGSSYEIIQSQPFDSRSYFQVNALQP-TNHY 838 +LY+++++SVKSTI+R+ A + + + +F+Q+EA LR ++ ++Q + R + G L+GL+ KEL+N+E++LE + IR K+ ++L EI+ + ++ +H+ N L K+ Q+N+ L + G + + ++S + ++ QP +HY Sbjct: 53 KLYDFASSSVKSTIERFNTAKMEEQELMNPA-SEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIH--QENVELYKKAYGTSNTNGLGHHELVDAVYESHAQVRLQLSQPEQSHY 221
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 46/152 (30.26%), Postives = 87/152 (57.24%), Query Frame = -3 Query: 404 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE-NERGQQNMNLMQGG---SSYEIIQSQP 844 RGRL+E+S++S + T++RY+ ++ + + + QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + +IRS+KN+ L ++ ++ +E L + N+ LR K+ E + +M+ GG S ++ QP Sbjct: 51 RGRLFEFSSSSCMYKTLERYRSCNYNSQDAAA---PENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQP 199
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 46/152 (30.26%), Postives = 87/152 (57.24%), Query Frame = -3 Query: 404 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE-NERGQQNMNLMQGG---SSYEIIQSQP 844 RGRL+E+S++S + T++RY+ ++ + + + QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + +IRS+KN+ L ++ ++ +E L + N+ LR K+ E + +M+ GG S ++ QP Sbjct: 51 RGRLFEFSSSSCMYKTLERYRSCNYNSQDAAA---PENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQP 199
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 41/120 (34.17%), Postives = 75/120 (62.50%), Query Frame = -3 Query: 485 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAK 844 R +LYE+S++S+ +TI+RY++ + N + N+Q + E + L +I ++ S R +LGE + + +EL+ +E +L++ +SRIR+KK +LL EIE ++ E +L N+ L+ K Sbjct: 51 RSKLYEFSSSSIAATIERYQRRIKEIGNNHKRND-NSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 43/129 (33.33%), Postives = 76/129 (58.91%), Query Frame = -3 Query: 467 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEAN--AQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER 844 RG+LYE+ S S+ T++RY+K + +T + N Q + E KL+ ++ N+Q + RN+LGE L L KEL+ +E +L+ + IRS + + + ++ +Q+RE L +N+ LR K+ E+ + Sbjct: 51 RGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQ 179
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 39/141 (27.66%), Postives = 79/141 (56.03%), Query Frame = -3 Query: 425 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSY 844 +G+L+EY+N+S ++ ++RY++ + + + E KL+ ++ +Q + ++ +GE L L+ KEL+N+E +L+ + IRS+KN+L+ I +QK++ L N L K+ E E+ Q ++ + S + Sbjct: 51 KGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQQISGINSSSLF 191 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |