CF832250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33 Identity = 73/169 (43.20%), Postives = 113/169 (66.86%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK--------ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 MGRGK+++KRIEN NRQVTF KRR+GLLKKA E+SVLCDAEV+LI+FS++G+LYEY+ +S + ++RY++ +A++ G+ C E KL+ ++ +Q ++++GE L LN KEL+ +E +LE + IRS+K++L+ I +Q++E L Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWC--------HEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSL 161
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33 Identity = 76/164 (46.34%), Postives = 107/164 (65.24%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS----VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEV+ IVFS +G+LYEY+ +S + +RY A + S E N + E KL+ +I +Q +++++GE L LN KEL+ +E +LE + I S+K+ L+ I +QK+E L Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGN---WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSL 161
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33 Identity = 69/158 (43.67%), Postives = 111/158 (70.25%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+N+S ++ ++RY++ + + + E KL+ ++ +Q + ++ +GE L L+ KEL+N+E +L+ + IRS+KN+L+ I +QK++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKD 158
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33 Identity = 75/161 (46.58%), Postives = 111/161 (68.94%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKAT---ADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS+RG+LYE+ S++S+ T++RY+K + + A QQE KL+ + +Q + RN+LGE L L+ KEL+ +E +L+ + +IR+ + + + ++ +Q +E Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKE 161
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33 Identity = 73/162 (45.06%), Postives = 114/162 (70.37%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKK---ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRGK+E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAE++L++FS+RG+LYE+ S + + T+D+Y+K AT D + + + Q Q+ KL+ ++ +Q+S R++LGE LS ++ EL+++E +++ + +IRS K + ++ ++ +E Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAK----DLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKE 158
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33 Identity = 70/158 (44.30%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+ +S ++ ++RY++ + + + E AKL+ ++ +Q + + +GE L LN KEL+N+E +L + IRS+KN+L+ I +QK++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQD 158
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33 Identity = 70/162 (43.21%), Postives = 117/162 (72.22%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHN 728 MGRGKI I++I+++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ +LY+++++SVKSTI+R+ A + + + +F+Q+EA LR ++ ++Q + R + G L+GL+ KEL+N+E++LE + IR K+ ++L EI+ + ++ +H+ Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPA-SEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHH 161
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32 Identity = 70/159 (44.03%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK-ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEV+L+VFS +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + IR++KN+L++ I +QK+E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKE 158
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32 Identity = 70/159 (44.03%), Postives = 112/159 (70.44%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK-ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEV+L+VFS +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + IRS+KN+L+ I +Q++E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKE 158
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 70/160 (43.75%), Postives = 111/160 (69.38%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LIVFS RG+LYE+++ S + TI+RY+ T + ++ + + + + +A L ++ ++ R +LGE L + +EL ++E +LE+ + IR +K +LL ++ ++++E+ L Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKL 159 The following BLAST results are available for this feature:
BLAST of CF832250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832250 ID=CF832250; Name=CF832250; organism=Citrus sinensis; type=EST; length=728bpback to top |