CF832255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 327.405 bits (838), Expect = 4.038e-89 Identity = 162/183 (88.52%), Postives = 174/183 (95.08%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 MAG+APEGSQFDA+ YD+KM ELL+ + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +V+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV EDQRIL +GVHVVVGTPGRVFDMLRRQSLRPDY Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDY 183
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 6.888e-89 Identity = 162/182 (89.01%), Postives = 174/182 (95.60%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 MAG+APEGSQFDA+ YD+KM ELLS + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV EDQRIL +GVHVVVGTPGRVFD++RRQSLRPD Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPD 182
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 6.888e-89 Identity = 163/181 (90.06%), Postives = 172/181 (95.03%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 MAGLAPEGSQFD +QYD KM E+L+ +DFFTSYD+V +SFD+MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV EDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEILT---EDFFTSYDDVCESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPD 178
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 6.888e-89 Identity = 164/182 (90.11%), Postives = 173/182 (95.05%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 MAG APEG+QFD RQ+D ++NE+L DGQD FFTSYDEV++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSV EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 180
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 4.464e-88 Identity = 162/182 (89.01%), Postives = 174/182 (95.60%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 MAG APEG+QFDARQ+D K+NE+L +GQD FFTSYD+V++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV EDQRILQAGVHVVVGTPGRVFDML+RQSLR D Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 180
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.643e-82 Identity = 150/182 (82.42%), Postives = 167/182 (91.76%), Query Frame = 2 Query: 116 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 MAG+A +G+Q+D RQ+DTKMN +L +G++ F+T+YDEV DSFDAM LQ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD LVQCQALVLAPTRELAQQIEKVMRALGDYLGVK ACVGGTSV EDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR D Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRAD 182
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 1.039e-52 Identity = 99/150 (66.00%), Postives = 122/150 (81.33%), Query Frame = 2 Query: 212 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 +++ EVYD+FD M L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTATF ILQQ+D + +CQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+V ED RIL++G HVVVGTPGRV+DM+ R+ LR Y Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQY 172
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.364e-51 Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 2 Query: 212 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 ++YDE DSFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ+LD + QCQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGTSV +D + LQ G VVVGTPGRV DM++R+ L+ D Sbjct: 18 SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTD 166
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.364e-51 Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 2 Query: 212 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 ++YDE DSFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ+LD + QCQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGTSV +D + LQ G VVVGTPGRV DM++R+ L+ D Sbjct: 18 SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTD 166
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 5.700e-51 Identity = 99/149 (66.44%), Postives = 119/149 (79.87%), Query Frame = 2 Query: 212 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 T+YDEV D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P DV+ QAQSGTGKTATF +LQ++D L QCQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT V +D LQAGVHVVVGTPGRV DM++R++L D Sbjct: 12 TNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTD 160 The following BLAST results are available for this feature:
BLAST of CF832255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832255 ID=CF832255; Name=CF832255; organism=Citrus sinensis; type=EST; length=661bpback to top |