CF832263

Overview
NameCF832263
Unique NameCF832263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832263 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.977e-25
Identity = 62/97 (63.92%), Postives = 70/97 (72.16%), Query Frame = -1
Query:  303 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 593
            + +L AY  A   A   L  THPIRLGLALNFSVF+YEI N   +AC LAK AFD AI+ELD L ++SYKDSTLIMQLLRDNLTLW SD T +   E
Sbjct:  154 QKSLDAYTKATTAA-ENLPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLIMQLLRDNLTLWASDQTAEGDVE 249          
BLAST of CF832263 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.813e-25
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = -1
Query:  297 ILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 479
            ILNSPDRACNLAKQAFDEAISELD+LGEESYKDSTLIMQLL DNLTLWTSD  +D GDEIK
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
BLAST of CF832263 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -1
Query:  321 EILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIT 482
            EI+NSP+RA  +AKQA DEA +E+++ G E YKDS L+MQLL++NL LWTS++T
Sbjct:  163 EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELT 216          
The following BLAST results are available for this feature:
BLAST of CF832263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_SCHMA1.977e-2563.9214-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
1433X_MAIZE9.813e-2590.1614-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
14338_ORYSJ6.597e-1361.11Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832263 ID=CF832263; Name=CF832263; organism=Citrus sinensis; type=EST; length=596bp
CCTTTTTTTATTTCATTCTAAGTTTAGCATAGCACTGAAAACACTACATA
TGAAACCCAAACCAAATACTTCTCATCAATAATTAAATCTAGTTTACAAT
CTGTTGGAACACATGAACCCTAAGTGCAGCCAACACTCAAGATTATCAGT
TCATGAGAATATCCTGCTAAAACAACCCACATGGCATCCATGTAAAATAA
AAGCCACAAGATAAAAATACAGATACATATCCTATGAACTGAACTCATTA
TTCATCACTGCTGCGTCTCCCCTGATTCACGTTTTGATGCTGCTTCCTTA
ATCTCATCTCCAGCATCATCAGTGATATCAGAAGTCCAAAGTGTCAGATT
ATCTCGGAGAAGCTGCATAATCAATGTACTGTCCTTGTATGATTCTTCAC
CCAAGGTATCAAGCTCAGAAATGGCCTCATCAAAAGCCTGCTTCGCAAGA
TTGCATGCACGATCTGGTGAGTTAAGGATTTCATAGTAGAACACAGAGAA
GTTGAGTGCAAGTCCCAGCCTTATGGGGTGAGTAGGGGCCAATTCAGCTA
AAGCAATATCCTGAGCTGACTTGTAGGCCAACAAAGTGCTCTCCGC
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