CF832281

Overview
NameCF832281
Unique NameCF832281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7925 contig Csv1_Contig7925:110..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.027e-56
Identity = 120/232 (51.72%), Postives = 151/232 (65.09%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYF 703
            FYS +CP++L T+  V+++  + + RI ASL+RL FHDCFV+GCDASILLD T +   EK A PNNNS RG+EVID +K+ VER CP VVSCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D +F    R+ CP   G      A  D+ TP+ FD  YF
Sbjct:   34 FYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYF 257          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.751e-56
Identity = 115/230 (50.00%), Postives = 152/230 (66.09%), Query Frame = 2
Query:   14 SFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            +FY  TC N L+TI   ++ A S + R+ ASLIRLHFHDCFV+GCDAS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+ FDN Y+
Sbjct:   24 TFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSS------DIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYY 246          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.902e-56
Identity = 117/232 (50.43%), Postives = 147/232 (63.36%), Query Frame = 2
Query:   14 SFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYF 703
            +FY ++CP  L TI+  +  A +SD R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF VID++K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS  AN   AN +LPG   +  EL+++F   G  + +D+VALSGAHT G+AQC  FR R+Y        D  ++A +   LR  CPQ  G   G LAN D TT + FDN Y+
Sbjct:   26 TFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYY 246          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.135e-55
Identity = 111/229 (48.47%), Postives = 148/229 (64.63%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            FYSSTCP   + ++  ++  F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  CP VVSCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP  FD++D  K  F   GLN + DLVAL+GAHT G A C   R RL++FN+TG PDP++DATFL QLR LCPQ G+       D  + + FD  YF
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVDIQKRKFLTKGLNTQ-DLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYF 258          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 4.314e-55
Identity = 110/229 (48.03%), Postives = 148/229 (64.63%), Query Frame = 2
Query:   20 YSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLD-ATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            Y ++CP   + +   ++     D R+ ASL+RLHFHDCFV+GCDAS+LLD T  +  EK A PN NS RGFEVID++K+ +E  CP  VSCADIL +AA  SV +SGGP W V +GR+DSRTA++  A   LP P  T+  L S+F+N+GL+ + D+VALSG HT G+A+C  F  RL     TG+P    D   FL+ L++LC   G    +   D+ TP  FDN+Y+
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPL-QTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYY 281          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.769e-54
Identity = 107/229 (46.72%), Postives = 150/229 (65.50%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            FYS TCP   + +   +KKA   + R  AS++R  FHDCFV+GCDAS+LLD T  +  EK +  N +S R FEV+D++K A+E+ACP  VSCADI+ +AA  +VAL+GGP W V LGR+DS TA++  ++  +P P      L   F    L+ K D+VALSG+H+ G+ +C     RLY+ + +GKPDP L+ ++ ++L KLCP GG+  V  + D  TP VFDN+YF
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYF 253          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.229e-54
Identity = 110/233 (47.21%), Postives = 151/233 (64.81%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY-DFNNTGKPDPTLDATFLQQLRKLCPQG---GNGGVLANFDVTTPDVFDNKYF 703
            +Y STCP V + I+  ++     D R  A +IRLHFHDCFV GCD S+LLD T T+  EK A+PN NS +G++++D +K  +E  CP VVSCAD+LTI A  +  L GGP W VP+GR+DS+TA+  LA  NLP P + L  + + F + GL+ + D+VAL GAHT G+AQC+ FR R+Y DF  T   +P +  T+L  LR++CP     G+  V A  D  TP++FDN  +
Sbjct:   34 YYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNP-VSETYLASLREICPASSGEGDSNVTA-IDNVTPNLFDNSIY 263          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.812e-53
Identity = 113/230 (49.13%), Postives = 142/230 (61.74%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGK-PDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            FY +TCP     + + +   FSSD RI   ++R+HFHDCFV GCD SIL+   NT   E+ A PN N  +GFEVIDN K  +E ACP VVSCADIL +AA  +V L+ G  W VP GRRD R +  + AN NLPGP D++   +  F  +GLN + DLV L G HT G A C  FR RL  FN TG+  DPT+D TFL QL+  CPQ G+G V  + D  +   +D  Y+
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLNTR-DLVVLVGGHTIGTAGCGVFRNRL--FNTTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYY 260          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.812e-53
Identity = 109/231 (47.19%), Postives = 142/231 (61.47%), Query Frame = 2
Query:   11 HSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            + +YS++CP   + +   ++  F SD  I   L+RLHFHDCFV GCD S+L+   +   +E+ A PN    RG EVID+ KA +E  CP VVSCADIL +AA  SV LS GPSW VP GR+D R +    A+ NLP P D++   K  F++ GL D  DLV L GAHT G+  C FFR RLY+F  TG  DPT+  +FL QL+ LCP  G+G      D+ +P  FD  +F
Sbjct:   31 NGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEAS-NLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCPPNGDGSKRVALDIGSPSKFDESFF 255          
BLAST of CF832281 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52
Identity = 109/229 (47.60%), Postives = 143/229 (62.45%), Query Frame = 2
Query:   17 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 703
            FYS +CPN    +E+++++ F+ D  I A+L R+HFHDCFV GCDAS+L+D T +  SEK A PN  S RGFE+ID +K A+E  CP  VSC+DI+T+A   +V L GGPS+ VP GRRD   +N   AN+ LP PF +++ + S F N G+N   D VAL GAHT G A C  F  R+ +F  TG PDP++D T   +LR  C   G    L      TP  FDN +F
Sbjct:   27 FYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFF 253          
The following BLAST results are available for this feature:
BLAST of CF832281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER68_ARATH1.027e-5651.72Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER4_ARATH1.751e-5650.00Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER1_HORVU3.902e-5650.43Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PERN1_TOBAC1.135e-5548.47Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER40_ARATH4.314e-5548.03Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER17_ARATH4.769e-5446.72Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER11_ARATH6.229e-5447.21Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER71_ARATH1.812e-5349.13Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER25_ARATH1.812e-5347.19Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER28_ARATH2.004e-5247.60Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832281 ID=CF832281; Name=CF832281; organism=Citrus sinensis; type=EST; length=703bp
CAACTTTCTCCACTCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
CTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAAAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAATC
TAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTCT
CCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGA
TTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAAC
CTTCTTACAACAACTGAGGAAACTATGCCCACAAGGCGGAAACGGCGGCG
TTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATAC
TTC
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