CF832283

Overview
NameCF832283
Unique NameCF832283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8502 contig Csv1_Contig8502:628..1133. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.339e-49
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAH+ AM+AAK AG L SYDPN+RLPLWPSP+ ARE I+SIW +A+ IKVSD E+ FLT  D  D+++ LSLW   LKLL+VT G+ GCRY+TK F+G+V  F V+TV                +  D S+  +E +LRE LKF+NACGAI TTKKGAIPAL
Sbjct:  156 EPCRSAHMAAMRAAKAAGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPAL 321          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.161e-48
Identity = 96/166 (57.83%), Postives = 116/166 (69.88%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAH+ AM+AAK AG L SYDPN+RLPLWPS + AR  I+SIW +A+ IKVSD E+ FLT  D  D+++ LSLW   LKLL+VT GE GCRY+TK F+G+V  F VNTV                +  D S+  +E +LRE LKF+NACGAI TTKKGAIPAL
Sbjct:  156 EPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPAL 321          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.161e-48
Identity = 96/166 (57.83%), Postives = 116/166 (69.88%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCRSAH+ AM+AAK AG L SYDPN+RLPLWPS + AR  I+SIW +A+ IKVSD E+ FLT  D  D+++ LSLW   LKLL+VT GE GCRY+TK F+G+V  F VNTV                +  D S+  +E +LRE LKF+NACGAI TTKKGAIPAL
Sbjct:  156 EPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPAL 321          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 95/166 (57.23%), Postives = 114/166 (68.67%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EPCR+AH+ AMK AK+AG LLSYDPN+RLPLWPS E A E I SIW++A++IKVSD E+ FLT  D   D+  LSL H  LKLL+VT GE GCRYYTK F+G V  + V  V                L  D S+L+DE +L+E L FANACGA+ TT+KGAIPAL
Sbjct:  144 EPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDDVVLSLMHDKLKLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPAL 309          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK_KLEPN (Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.442e-14
Identity = 56/168 (33.33%), Postives = 79/168 (47.02%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKL--VDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EP RS    A++A K AG  +S+DPN+R  LW  P++ R+ +      A+ IK+S+ EL F++GSD I    A         LLLVT G+ G +    + RG V  F    V                L  +    + ++   L   L  A  CGA+ TT KGA+ AL
Sbjct:  133 EPSRSTTFAALEAIKRAGGYVSFDPNIRSDLWQDPQDLRDCLDRALALADAIKLSEEELAFISGSDDIVSGIARLNARFQPTLLLVTQGKAGVQ---AALRGQVSHFPARPVVAVDTTGAGDAFVAGLLAGLAAHGIPDNLAALAPDLALAQTCGALATTAKGAMTAL 297          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: YDJE_BACSU (Uncharacterized sugar kinase ydjE OS=Bacillus subtilis GN=ydjE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.340e-12
Identity = 57/174 (32.76%), Postives = 84/174 (48.28%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKA----EVIKVSDVELEFLTGSDKIDDESALSLWHP-NLKLLLVTLGEHGCRYYTKSFRGAVDAFHVNTVXXXXXXXXXXXXXXRKLVDD---QSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            +P  SA+L  M  AK+ G  +S+DPN R  LW        + +S+  KA    + +KVSD ELE ++G    D E  +++ H     ++ VTLG+ G        R  + +  V ++               +L +    QSV  D  +LREI+ FAN  GA+  TK GAI AL
Sbjct:  142 DPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVS---EFVSVAKKAIAVSDFVKVSDEELEIISGVK--DHEKGVAILHEIGANIVAVTLGKSGTLLSNGKDREIIPSIPVTSIDSTGAGDAFVGAALYQLANTDQIQSVDADFVKLREIVAFANKVGALVCTKIGAIDAL 310          
BLAST of CF832283 vs. ExPASy Swiss-Prot
Match: SCRK_ECOLX (Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 51/169 (30.18%), Postives = 74/169 (43.79%), Query Frame = 1
Query:    7 EPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFRGAVDAF---HVNTVXXXXXXXXXXXXXXRKLVDDQSVLEDEPRLREILKFANACGAITTTKKGAIPAL 504
            EP R++   AM A + AG  +S+DPN+R  LW      R  +      A+V+K+S+ E   ++G  + D +         + +LLVT G  G       +RG V  F    VN V                L     +  DE  +R I+  A  CGA+  T KGA+ AL
Sbjct:  133 EPSRTSAFTAMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQLADVVKLSEEEWRLISGKTQNDRDICALAKEYEIAMLLVTKGAEG---VVVCYRGQVHHFAGMSVNCVDSTGAGDAFVAGLLTGL-SSTGLSTDEREMRRIIDLAQRCGALAVTAKGAMTAL 297          
The following BLAST results are available for this feature:
BLAST of CF832283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SCRK2_MAIZE2.339e-4957.83Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK2_ORYSJ1.161e-4857.83Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI1.161e-4857.83Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK5_ARATH6.369e-4757.23Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK_KLEPN5.442e-1433.33Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3... [more]
YDJE_BACSU1.340e-1232.76Uncharacterized sugar kinase ydjE OS=Bacillus subt... [more]
SCRK_ECOLX5.093e-1230.18Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832283 ID=CF832283; Name=CF832283; organism=Citrus sinensis; type=EST; length=506bp
AGGGTGGAGCCATGCCGATCAGCGCACTTGGAGGCAATGAAAGCAGCCAA
GGAAGCAGGAGCCCTTCTCTCATACGACCCCAACCTCCGGCTACCGTTGT
GGCCCTCGCCGGAGGAGGCGCGCGAGCAGATAATGAGCATCTGGGACAAG
GCCGAGGTAATCAAAGTCAGTGATGTGGAGCTTGAATTCCTCACCGGGAG
TGACAAGATTGATGATGAATCAGCATTGTCGCTTTGGCATCCCAACTTGA
AACTCCTTTTGGTCACCCTTGGTGAGCATGGCTGCAGATACTACACCAAG
AGTTTCAGAGGAGCAGTGGATGCTTTTCATGTGAACACAGTAGATACAAC
CGGCGCTGGTGATGCATTTGGTGGGGGTCTTTTACGGAAGCTTGTTGATG
ACCAATCTGTTCTTGAGGATGAACCAAGGTTGCGGGAGATATTGAAATTT
GCAAATGCCTGTGGAGCCATCACTACCACCAAGAAGGGAGCAATTCCAGC
TCTACC
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