CF832285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.400e-19 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+I ENDEVL+AGFGRKGHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 91 LNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_ASPFU (40S ribosomal protein S23 OS=Aspergillus fumigatus GN=rps23 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.400e-19 Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+I ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 93 LNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.746e-19 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 93 LNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.724e-18 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LNYI ENDEVL+AGFGR GHAVGDIPGVRFK+VKV+ VSL ALF KKE+PRS Sbjct: 91 LNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.864e-18 Identity = 40/53 (75.47%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ ENDEVL++GFGR GHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 91 LNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.118e-17 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ ENDEVL++GFGRKG A GDIPGVRFKVVKV+GV L ALF EKKEKPR+ Sbjct: 91 LNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.669e-16 Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+ ENDEVL+AGFGRK HAVGDIPGVRFKVV+++ VSLLAL+K KE+P+S Sbjct: 91 LNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.669e-16 Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 150 LN++ ENDEVL+AG GR+GHAVGDIPGVRFKVV V G+SLLALFK KKEK Sbjct: 92 LNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.730e-15 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 153 LNYI END+VL+AG GR GH+VGDIPGVRFKVVKVS VSL+A+++ K+KP Sbjct: 91 LNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141
BLAST of CF832285 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 LNYIHENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 153 + YI NDEV + GFG+KG +VGDIPG+RFKV KV VSL A+F KKEKP Sbjct: 88 VTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIFTGKKEKP 138 The following BLAST results are available for this feature:
BLAST of CF832285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832285 ID=CF832285; Name=CF832285; organism=Citrus sinensis; type=EST; length=358bpback to top |