CF832300

Overview
NameCF832300
Unique NameCF832300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: TAH18_SCHPO (Probable NADPH reductase TAH18 OS=Schizosaccharomyces pombe GN=tah18 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.584e-15
Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 1
Query:  340 DRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF--ALKEAGTELGPSLLFFGCRNRKMD 855
            +RL+  +S    D+Y  +    +R++LE + EF S + P+     A  P ++ R YSI++    +   + +  ALV  +T      +G+CS W+ + L    S +    P F+      L   +  P+IM+GPGTG+AP R  +QER    LKE       +LLFFGCRN+ MD
Sbjct:  295 ERLQEFSSYKNIDDYYDYTTRPRRTVLETLQEFKSVQIPIEYALDAF-PVIRGRQYSIANRCDNSTGILELAVALVKYQTILKSPRQGICSRWICD-LHENTSFNIDILPGFLN-----LSYQSNKPLIMVGPGTGVAPLRALIQERIYNGLKE-------NLLFFGCRNKSMD 454          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.584e-15
Identity = 81/276 (29.35%), Postives = 124/276 (44.93%), Query Frame = 1
Query:   13 SDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASP-AGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            SD+   H+E  +  +GL Y+ GD +GV+ EN    + E L LLGLS +    ++   +   PL ++ L  +F      T L +                       T+   L  + S  A   +YAQ       + +  M      K     F + + P L PR YSI+SS     + +H+T  +V  +   G    G  S+++ + L  E  N      +FV  + NF+LP +   P+IMIGPGTG+APFR F+Q+R    +     G + LFFG
Sbjct:  258 SDKDVRHIEIDLGDSGLHYKPGDALGVWYENDPALIRECLDLLGLSGEESIKVN---DKILPLAQA-LQQSFELTVNNTRLVE------------------SYATLTQNKALEKIISDKAALQDYAQ------NTPIVDMIRQAGGKLTAEQFVSLLRP-LTPRLYSIASSQAEVENEVHLTVGVVRYEID-GHKRAGGASSFLADRLA-ENGN----LRVFVEHNDNFRLPDNPDAPVIMIGPGTGVAPFRAFMQQR----DNDGAKGKNWLFFG 494          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: PNO_CRYPV (Pyruvate dehydrogenase [NADP+] OS=Cryptosporidium parvum GN=PFOR PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 76/297 (25.59%), Postives = 130/297 (43.77%), Query Frame = 1
Query:   16 DRSCTHLEFHIAGTG-----LTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSE-----------FPSAKPPLGVFFAAIVPRLQPRYYSISSSPR-VAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPM----EKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEA-GTELGPSLLFFGCR 840
            D+   H+ F + G G     L+Y  GD + +Y +N      +A+ + G +P +   L  ++E+           T       ++L  Y                       + +  R+ ++P  K +  +W     + L+E  S            F SA+P L      IVP ++ R YSI+S  + V   +I +   +V  K  +G +  G C+ ++ N LP+     K +     P  ++ S F LP D + P+IM   GTG+APFR F+Q +  +++    E+GP +L+FGCR
Sbjct: 1520 DKDVRHIVFKLIGDGGDTPSLSYCLGDSLALYGQNPVNEAIKAIEMFGYNPYSLLRLSINEENEAN-------NTNKVNQRYSSLFGYDITVLQLFVECLDLWGKPNRKFFQ-EFYRYCSNPEEKIQAKKWAQNEGKKLIEEFSSKTGTYLDVFKMFESARPTLAQLLD-IVPFIKSRSYSIASCNKFVNGEKIELCVGIVDWKLESGEIRYGQCTGFL-NRLPILDSESKIDSIPRLPSNIKASAFNLPFDYRSPVIMACMGTGIAPFRAFVQNKKYIRDVLKEEIGPVILYFGCR 1806          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOUT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain UTI89 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 82/276 (29.71%), Postives = 125/276 (45.29%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     K ++     A+   +++ M  F  A+         + P L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYATL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP-LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL6 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6 GN=cysJ PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 82/276 (29.71%), Postives = 125/276 (45.29%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     K ++     A+   +++ M  F  A+         + P L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYATL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP-LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 82/276 (29.71%), Postives = 125/276 (45.29%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     K ++     A+   +++ M  F  A+         + P L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYATL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP-LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOK1 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O1:K1 / APEC GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 82/276 (29.71%), Postives = 125/276 (45.29%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     K ++     A+   +++ M  F  A+         + P L PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LP + + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYATL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP-LTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.702e-15
Identity = 81/276 (29.35%), Postives = 126/276 (45.65%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     + ++     A+   +++ M  F  A+         + P L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVDGK-TLP-------LAEALEWHFELTVNTANIVENYATL-----TRSESLLPLVGDKAQLQH----YAATTPIVD-MVRFSPAQLDAQALIDLLRP-LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAA---EGVE-GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi A GN=cysJ PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.702e-15
Identity = 81/276 (29.35%), Postives = 125/276 (45.29%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     + ++     A+   +++ M  F  A+         + P L PR YSI+S+     S +H+T  +V      GR   G  S+++   +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVDGK-TLP-------LAEALEWHFELTVNTANIVENYATL-----TRSESLLPLVGDKAQLQH----YAATTPIVD-MVRFSPAQLDAQALIGLLRP-LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLAGRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15
Identity = 81/276 (29.35%), Postives = 126/276 (45.65%), Query Frame = 1
Query:   10 SSDRSCTHLEFHIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            +S++   H+E  +  +GL Y+ GD +GV+ +N    V+E + LL L  D         E  T  GK TLP       L  AL  +                      T ++ L  L     + ++     A+   +++ M  F  A+         + P L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  251 NSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGD---------EPVTVDGK-TLP-------LAEALEWHFELTVNTANIVENYATL-----TRSESLLPLVGDKAQLQH----YAATTPIVD-MVRFSLAQLDAQALIDLLRP-LTPRLYSIASAQAEVESEVHITVGVVCYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAA---EGVE-GKNWLFFG 488          
The following BLAST results are available for this feature:
BLAST of CF832300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
TAH18_SCHPO1.584e-1533.33Probable NADPH reductase TAH18 OS=Schizosaccharomy... [more]
CYSJ_ZYMMO1.584e-1529.35Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
PNO_CRYPV2.069e-1525.59Pyruvate dehydrogenase [NADP+] OS=Cryptosporidium ... [more]
CYSJ_ECOUT2.069e-1529.71Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOL62.069e-1529.71Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOL52.069e-1529.71Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOK12.069e-1529.71Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY2.702e-1529.35Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPA2.702e-1529.35Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB3.528e-1529.35Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832300 ID=CF832300; Name=CF832300; organism=Citrus sinensis; type=EST; length=857bp
TTCTACTCCTCATCTGATCGCTCTTGCACCCATCTAGAATTTCATATTGC
TGGCACTGGCCTCACGTATGAAACAGGTGATCATGTTGGTGTTTACTGTG
AGAATCTATCTGAGACCGTGGAGGAGGCATTGTCATTATTAGGCCTATCA
CCAGACACTTATTTTTCCCTTCATACTGATAAAGAGGATGGCACACCACT
TGGTAAAAGCACCTTGCCTCCCACTTTCCCACCGTGCTCTTTAAGAACAG
CATTAACTAAATATGCTGATCTTTTGAGCTCCCCAAAGAAGTCTGCATTA
CTTGCCTTAGCAGCTCATGCATCTGACCCCACTGAAGCAGATCGGTTAAG
ACATCTTGCATCACCTGCTGGAAAGGATGAATATGCACAATGGATTGTTG
CAAGTCAGAGAAGCCTTCTGGAGGTCATGAGTGAATTTCCTTCTGCCAAG
CCCCCACTTGGTGTCTTTTTTGCAGCAATTGTCCCACGTTTGCAACCAAG
ATATTATTCAATTTCATCTTCTCCAAGGGTTGCACCATCTAGAATTCATG
TTACCTGTGCTCTGGTTTATGAGAAAACACCAACAGGACGTGTTCACAAA
GGATTGTGCTCCACTTGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAA
TGACTGCAGCTGGGCACCCATTTTTGTTAGGCAATCAAACTTCAAACTCC
CTGCAGATGCTAAAGTGCCTATCATTATGATTGGCCCTGGCACTGGATTA
GCTCCTTTCAGGGGTTTCCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGG
AACAGAACTGGGACCCTCTCTATTATTTTTTGGATGCAGGAACCGTAAGA
TGGATTA
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