CF832300

Overview
NameCF832300
Unique NameCF832300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7597 contig Csv1_Contig7597:222..1078. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            L PR YSI+SS     S +H+T   V  +   GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  385 LTPRLYSIASSQAEVESEVHITVGAVRYEIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFG 490          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRN 843
            L PR YSISSS     + IH+T  +V +K  +G V+ G  S ++  SL   KS+D     IF++ + NF+LP +   PIIMI  GTG+APFR F+Q+R    +     G + LFFG  N
Sbjct:  385 LTPRLYSISSSQEEIDNEIHITVGVV-KKLISGHVYLGGASGYLSQSL---KSDDI--IKIFIQTNDNFRLPINKNTPIIMISSGTGIAPFRAFMQQR----DNDNADGKNWLFFGNPN 493          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: TAH18_ASHGO (Probable NADPH reductase TAH18 OS=Ashbya gossypii GN=TAH18 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 1
Query:  334 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPI--FVRQSNFKLPADAKV-PIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMD 855
            + D+LR  A      +   +    +RS+LEV+ +F S + P   +    +P ++PR++SISS P      I +T A+V  KT   R+ +GLC+ ++         +D S   I  +  Q N  LPA  +  P+IMI PG GLAP +  +  +           P LLFFG R +  D
Sbjct:  356 QRDKLREFAESEDMQDIYDYCNRPRRSILEVVQDFMSLRLPWE-YILDYLPHIKPRFFSISSQP--CNKDIELTIAIVRYKTILRRIRRGLCTNYI---------SDLSEGSIIRYKVQYNDLLPAGKQDRPVIMISPGVGLAPMKCLIYAQL--------FNPMLLFFGNRYKDKD 512          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: MTRR_CAEEL (Putative methionine synthase reductase OS=Caenorhabditis elegans GN=tag-165 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 1
Query:  334 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVH--KGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLP-------ADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTE---LGPSLLFFGCRNRKMD 855
            E  RL  L S  G  ++  ++     SL +++  FP+ KPP+      ++PRL PR YS+SS        I+            GR H  KGL + W+ +    +K       P     + F+LP       +  K+P++M+GPGTG++ F  FL     LK+         P +LFFGCR+  +D
Sbjct:  401 EKRRLLELCSAQGMKDFTDFVRTPGLSLADMLFAFPNVKPPVDRLIE-LLPRLIPRPYSMSSYENRKARLIYSEMEF---PATDGRRHSRKGLATDWLNSLRIGDKVQVLGKEP-----ARFRLPPLGMTKNSAGKLPLLMVGPGTGVSVFLSFLHFLRKLKQDSPSDFVDVPRVLFFGCRDSSVD 577          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: CYSJ_SALAR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFG 834
            L PR YSI+SS     + +H+T  +V      GR   G  S+++      ++ +D     +F+  + NF+LP + + PIIMIG GTG+APFR F+Q+R A  EA    G + LFFG
Sbjct:  383 LTPRLYSIASSQAEVENEVHLTVGVVRYDIE-GRARAGGASSFLA-----DRVDDEGEVRVFIEHNDNFRLPTNPETPIIMIGSGTGIAPFRAFIQQR-AADEAS---GKNWLFFG 488          
BLAST of CF832300 vs. ExPASy Swiss-Prot
Match: TAH18_YEAST (Probable NADPH reductase TAH18 OS=Saccharomyces cerevisiae GN=TAH18 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 1
Query:  334 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPAD-AKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSL-LFFGCRNRKMD 855
            + ++LR  A+     +   +    +RS+LEV+ +F S K P   +    +P ++PRYYSISS P      I +T A+V  KT   ++ +G+C+ ++      E+         +  Q+N  +  +    P+I++GPG GLAP          L     E+   + L FGCR +  D
Sbjct:  359 QREKLRQFATDQDMQDLYDYCNRPRRSILEVLEDFISVKLPWK-YVLDYLPIIKPRYYSISSGP--GDPNIELTVAIVKYKTILRKIRRGICTNYIARLQEGEQIR-------YKLQNNHIIKKEFLNKPMILVGPGVGLAPL---------LSVVKAEISKDIKLLFGCRYKDKD 515          
The following BLAST results are available for this feature:
BLAST of CF832300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CYSJ_CITK81.255e-1240.52Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BUCAI1.255e-1242.02Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTI1.639e-1239.66Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_ASHGO2.141e-1231.64Probable NADPH reductase TAH18 OS=Ashbya gossypii ... [more]
MTRR_CAEEL1.062e-1130.11Putative methionine synthase reductase OS=Caenorha... [more]
CYSJ_SALAR4.037e-1138.79Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_YEAST8.994e-1128.41Probable NADPH reductase TAH18 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832300 ID=CF832300; Name=CF832300; organism=Citrus sinensis; type=EST; length=857bp
TTCTACTCCTCATCTGATCGCTCTTGCACCCATCTAGAATTTCATATTGC
TGGCACTGGCCTCACGTATGAAACAGGTGATCATGTTGGTGTTTACTGTG
AGAATCTATCTGAGACCGTGGAGGAGGCATTGTCATTATTAGGCCTATCA
CCAGACACTTATTTTTCCCTTCATACTGATAAAGAGGATGGCACACCACT
TGGTAAAAGCACCTTGCCTCCCACTTTCCCACCGTGCTCTTTAAGAACAG
CATTAACTAAATATGCTGATCTTTTGAGCTCCCCAAAGAAGTCTGCATTA
CTTGCCTTAGCAGCTCATGCATCTGACCCCACTGAAGCAGATCGGTTAAG
ACATCTTGCATCACCTGCTGGAAAGGATGAATATGCACAATGGATTGTTG
CAAGTCAGAGAAGCCTTCTGGAGGTCATGAGTGAATTTCCTTCTGCCAAG
CCCCCACTTGGTGTCTTTTTTGCAGCAATTGTCCCACGTTTGCAACCAAG
ATATTATTCAATTTCATCTTCTCCAAGGGTTGCACCATCTAGAATTCATG
TTACCTGTGCTCTGGTTTATGAGAAAACACCAACAGGACGTGTTCACAAA
GGATTGTGCTCCACTTGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAA
TGACTGCAGCTGGGCACCCATTTTTGTTAGGCAATCAAACTTCAAACTCC
CTGCAGATGCTAAAGTGCCTATCATTATGATTGGCCCTGGCACTGGATTA
GCTCCTTTCAGGGGTTTCCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGG
AACAGAACTGGGACCCTCTCTATTATTTTTTGGATGCAGGAACCGTAAGA
TGGATTA
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