CF832301

Overview
NameCF832301
Unique NameCF832301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:327..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_RAT (NADPH--cytochrome P450 reductase OS=Rattus norvegicus GN=Por PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + GAL+QL VAFSRE   K YVQH +      +W ++ EG A++YVCGDA+ MA+DV  T + IV E G ++ ++A   VK L   GRY  DVW
Sbjct:  572 DYLYREELARFHKDGALTQLNVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBF1 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG ++QL VAFSR+   K YVQH+++E +  +W  L +GAY+YVCGDA  MA+DVH  L  +V++ G     +AE  V  L+   RY RDV+
Sbjct:  500 DFLYQVEWQKYLKSGIVNQLDVAFSRDQQEKVYVQHRILEHAAQVWQWLQDGAYIYVCGDATRMAKDVHEALICVVEQHGQKTREEAEQFVNELRKAKRYQRDVY 604          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_BACSU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Bacillus subtilis GN=cysJ PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21
Identity = 45/105 (42.86%), Postives = 74/105 (70.48%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E  N+++ G L+++ VAFSR+   K YVQH+M+E S +++  L EGA +Y+CGD K MA DVH TL  I++++G++   +AE+ + ++Q   RY RDV+
Sbjct:  501 DFLYQTEWQNWLKDGVLTKMDVAFSRDTEEKVYVQHRMLEHSAELFEWLQEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY 605          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio parahaemolyticus GN=cysJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21
Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG LS+L VAFSR+   K YVQH+++E +  +W  + +GAY+YVCGDA  MA+DVH  L  + +++G +    AE  + +L+   RY RDV+
Sbjct:  519 DFLYQVEWQKYLKSGVLSRLDVAFSRDQVEKVYVQHRILENAAQVWQWIQDGAYIYVCGDATRMAKDVHDALVIVAEQEGKMPRDDAEQFINDLRKAKRYQRDVY 623          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_CAVPO (NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y +EL  F + G L+QL VAFSRE   K YVQH +      +W ++ E GA++YVCGDA+ MARDV  T   I  E G ++ ++A   VK L   GRY  DVW
Sbjct:  572 DYLYREELAQFHKDGTLTQLNVAFSREQAQKVYVQHLLKRDQEHLWKLIHEDGAHIYVCGDARNMARDVQNTFCNIAAELGGMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus (strain YJ016) GN=cysJ PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG L++L VAFSR+   K YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  512 DFLYQVEWQKYLKSGLLTKLDVAFSRDQAEKVYVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRGDAEEFINDLRKAKRYQRDVY 616          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus GN=cysJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG L++L VAFSR+   K YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  512 DFLYQVEWQKYLKSGLLTKLDVAFSRDQAEKVYVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRDDAEEFINDLRKAKRYQRDVY 616          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_PHOPR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Photobacterium profundum GN=cysJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +++SG + QL VAFSR+   K YVQH+++E +  +W  L EGA++YVCGD   MA+DVH  L T++++QG     +AE  +  L+ + RY +DV+
Sbjct:  501 DFLYQVEWQKYLKSGVVQQLDVAFSRDQVEKVYVQHRVLEHAEQVWQWLQEGAHVYVCGDMNHMAKDVHDALLTVIEQQGKQSREQAEQYLNELRKSKRYQKDVY 605          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_SALTR (NADPH--cytochrome P450 reductase (Fragments) OS=Salmo trutta PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.344e-20
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            DY+Y++EL    + GAL++L VAFSRE   K YVQH + +   D+W  + E  A++Y+CGDA+ MARDV    + I +E G +  ++A   +K L   GRY +DVW
Sbjct:  495 DYLYQEELEQAHKKGALTKLNVAFSREQDQKVYVQHLLRKNKVDLWRQIHEDYAHIYICGDARNMARDVQTAFYEIAEELGGMTRTQATDYIKKLMTKGRYSQDVW 600          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ERWCT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Erwinia carotovora subsp. atroseptica GN=cysJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+ + +A+SR+   K YVQ K+ EK  ++W  + +GA+LYVCGDA  MA+DV R L  ++ E G +DS +A+  + +L++  RY RDV+
Sbjct:  505 DFLYQVEWQRYVKEGLLTHIDLAWSRDQAHKIYVQDKLREKGAEVWRWIQDGAHLYVCGDANRMAKDVERALLDVIVEHGGMDSEQADEFLSDLRLERRYQRDVY 609          
The following BLAST results are available for this feature:
BLAST of CF832301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
NCPR_RAT4.393e-2148.11NADPH--cytochrome P450 reductase OS=Rattus norvegi... [more]
CYSJ_VIBF15.738e-2143.81Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BACSU5.738e-2142.86Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBPA7.494e-2141.90Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_CAVPO2.180e-2047.17NADPH--cytochrome P450 reductase OS=Cavia porcellu... [more]
CYSJ_VIBVY2.180e-2040.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBVU2.180e-2040.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_PHOPR2.180e-2041.90Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_SALTR6.344e-2043.40NADPH--cytochrome P450 reductase (Fragments) OS=Sa... [more]
CYSJ_ERWCT1.082e-1940.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832301 ID=CF832301; Name=CF832301; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTAATATGAGAAACCAAACTTGCAGTTTATATTAT
CCATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATT
GAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCC
TAGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACA
AAAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAA
AAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAAT
AGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATT
TATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCA
GGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTT
GCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGC
TCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTT
GGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGA
TATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGT
CCCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAAC
AAAGTTGTTGAGCTCATCCTCATAAATGTAATCCATC
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