CF832301

Overview
NameCF832301
Unique NameCF832301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:327..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  I  E G L S  AE   + L+   RY +DV+
Sbjct:  500 DFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLAIAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SERP5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Serratia proteamaculans (strain 568) GN=cysJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  + EGA++YVCGDA  MA+DV  TL  +V E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAKDVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY 599          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain ANA-3) GN=cysJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19
Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  500 DFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLAVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHEON (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella oneidensis GN=cysJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18
Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  503 DFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAKDVHQALLAVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 607          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: NCPR_ASPNG (NADPH--cytochrome P450 reductase OS=Aspergillus niger GN=cprA PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = -2
Query:  419 DYIYEDELNNFV-QSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+DE   +  Q G   ++I AFSREGP K YVQH++ E S  + ++L + A  YVCGDA  MAR+V+  L  I+  Q  L + K E MVK+++  GRY  DVW
Sbjct:  587 DFLYKDEWKTYQDQLGDNLKIITAFSREGPQKVYVQHRLREHSELVSDLLKQKATFYVCGDAANMAREVNLVLGQIIAAQRGLPAEKGEEMVKHMRRRGRYQEDVW 692          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-4) GN=cysJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  500 DFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLGVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_KLEP7 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 40/105 (38.10%), Postives = 72/105 (68.57%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E  ++V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV  TL  ++ E G++D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQSYVKEGLLTRIDLAWSRDQQQKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVENTLLEVIAEYGAMDAEAADEFLSELRVERRYQRDVY 599          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 44/106 (41.51%), Postives = 70/106 (66.04%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+ + +A+SR+   K YVQ K+ EK+ +IW  + E GAYLYVCGDA  MA+DV + L  I++++G +D   A+  +  L++  RY RDV+
Sbjct:  501 DFLYQVEWQAYVKQGLLTHIDLAWSRDQAKKVYVQDKLREKAAEIWKWIKEDGAYLYVCGDATHMAKDVDKALIDIIRQEGGMDEEAADEFLTELRLERRYQRDVY 606          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERE8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 40/105 (38.10%), Postives = 71/105 (67.62%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L++  RY RDV+
Sbjct:  497 DFLYQVEWQRYVKDGLLTRIDLAWSRDQADKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRLARRYQRDVY 601          
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  514 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 618          
The following BLAST results are available for this feature:
BLAST of CF832301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CYSJ_SHESR7.014e-1941.90Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SERP57.014e-1940.00Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESA9.161e-1940.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHEON1.196e-1840.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_ASPNG1.563e-1845.28NADPH--cytochrome P450 reductase OS=Aspergillus ni... [more]
CYSJ_SHESM1.563e-1840.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_KLEP71.563e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ZYMMO3.481e-1841.51Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERE83.481e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPS4.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832301 ID=CF832301; Name=CF832301; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTAATATGAGAAACCAAACTTGCAGTTTATATTAT
CCATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATT
GAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCC
TAGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACA
AAAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAA
AAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAAT
AGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATT
TATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCA
GGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTT
GCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGC
TCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTT
GGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGA
TATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGT
CCCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAAC
AAAGTTGTTGAGCTCATCCTCATAAATGTAATCCATC
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