CF832301

Overview
NameCF832301
Unique NameCF832301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:327..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis (strain Pestoides F) GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  508 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPN (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  508 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPE (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  502 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  502 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_YERP3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  508 DFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  497 DFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANCMAKDVEQALLEVIAEFGGMDAEAADEFLSELRVERRYQRDVY 601
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri GN=cysJ PE=3 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIF8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri serotype 5b (strain 8401) GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIDS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
The following BLAST results are available for this feature:
BLAST of CF832301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CYSJ_YERPP4.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPN4.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPE4.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPA4.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERP34.546e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_CITK85.938e-1838.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHISS7.755e-1837.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIFL7.755e-1837.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIF87.755e-1837.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIDS7.755e-1837.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832301 ID=CF832301; Name=CF832301; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTAATATGAGAAACCAAACTTGCAGTTTATATTAT
CCATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATT
GAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCC
TAGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACA
AAAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAA
AAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAAT
AGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATT
TATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCA
GGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTT
GCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGC
TCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTT
GGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGA
TATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGT
CCCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAAC
AAAGTTGTTGAGCTCATCCTCATAAATGTAATCCATC
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