CF832301

Overview
NameCF832301
Unique NameCF832301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:327..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL6 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6 GN=cysJ PE=3 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOL5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOK1 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O1:K1 / APEC GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 40/105 (38.10%), Postives = 69/105 (65.71%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ENTS8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 41/105 (39.05%), Postives = 68/105 (64.76%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  L EGA+LYVCGDA  MA+DV + L  ++   G +D+  A+  +  L++  RY RDV+
Sbjct:  496 DFLYQVEWQRYVKEGLLTRIDLAWSRDQDHKIYVQDKIREQGAELWRWLQEGAHLYVCGDANRMAKDVEQALLEVIAAYGGMDAEAADEYLSELRVERRYQRDVY 600
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIBS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella boydii serotype 4 (strain Sb227) GN=cysJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 39/105 (37.14%), Postives = 69/105 (65.71%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDIEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_ENT38 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Enterobacter sp. (strain 638) GN=cysJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 41/105 (39.05%), Postives = 68/105 (64.76%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  ++ GA+LYVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  497 DFLYQVEWQRYVKEGVLSRIDLAWSRDQKQKIYVQDKLREQGAELWAWINNGAHLYVCGDANRMAKDVEQALLEVIAEFGGMDIETADEFLSELRVERRYQRDVY 601
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: REDA_DICDI (NADPH oxidoreductase A OS=Dictyostelium discoideum GN=redA PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 42/105 (40.00%), Postives = 67/105 (63.81%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y  EL  +   G L +L  AFSRE   K YVQ++++E S  I ++++ G ++Y+CGDAK MA  VH TL  I+ +  S+D + A++++  L+   RY +DVW
Sbjct:  527 DFLYSKELQQYHNDG-LIKLYTAFSRETSQKVYVQNRLLENSQQICDLINAGGHIYICGDAKSMAPQVHETLSLIITKHMSIDEADAQALLHKLEKEKRYQKDVW 630
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_SALCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella choleraesuis GN=cysJ PE=3 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 39/105 (37.14%), Postives = 70/105 (66.67%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G++D   A+  +  L++  RY RDV+
Sbjct:  495 DFLYQVEWQRYVKEGMLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832301 vs. ExPASy Swiss-Prot
Match: CYSJ_BLOFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Blochmannia floridanus GN=cysJ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.947e-17
Identity = 38/105 (36.19%), Postives = 68/105 (64.76%), Query Frame = -2 
Query:  419 DYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 733
            D++Y+ E   + +SG L+++  A+SR+   K YVQ K++    ++W+ + +GAY+YVCGDAK MARDV + L T+V   G+++  ++      +++  RY RD++
Sbjct:  506 DFLYQIEWKTYFKSGILNKIDTAWSRDQDYKVYVQDKLLSNGLELWDWIQKGAYIYVCGDAKYMARDVEQALVTVVSIHGNMNMDQSNDFWNEMRVQHRYQRDIY 610
The following BLAST results are available for this feature:
BLAST of CF832301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CYSJ_ECOL61.013e-1737.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOL51.013e-1737.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOK11.013e-1737.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTI1.323e-1738.10Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ENTS81.323e-1739.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIBS1.728e-1737.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ENT381.728e-1739.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
REDA_DICDI2.256e-1740.00NADPH oxidoreductase A OS=Dictyostelium discoideum... [more]
CYSJ_SALCH2.256e-1737.14Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BLOFL2.947e-1736.19Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832301 ID=CF832301; Name=CF832301; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTAATATGAGAAACCAAACTTGCAGTTTATATTAT
CCATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATT
GAACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCC
TAGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACA
AAAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAA
AAGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAAT
AGCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATT
TATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCA
GGATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTT
GCAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGC
TCTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTT
GGCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGA
TATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGT
CCCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAAC
AAAGTTGTTGAGCTCATCCTCATAAATGTAATCCATC
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