CF832302

Overview
NameCF832302
Unique NameCF832302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7597 contig Csv1_Contig7597:226..1091. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.040e-14
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 3
Query:  486 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYE 863
            L PR YSISSS     + IH+T  +V +K  +G V+ G  S ++  SL   KS+D     IF++ + NF+LP +   PIIMI  GTG+APFR F+Q+R    +     G + LFFG  N   D++Y+
Sbjct:  385 LTPRLYSISSSQEEIDNEIHITVGVV-KKLISGHVYLGGASGYLSQSL---KSDDI--IKIFIQTNDNFRLPINKNTPIIMISSGTGIAPFRAFMQQR----DNDNADGKNWLFFGNPNFTEDFLYQ 501          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: TAH18_CANAL (Probable NADPH reductase TAH18 OS=Candida albicans GN=TAH18 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.970e-14
Identity = 74/286 (25.87%), Postives = 120/286 (41.96%), Query Frame = 3
Query:   33 EFHFAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPT---FPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEAD------RLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYE 863
            +F F+  GL Y  GD V ++  N  E V+  L     S   +  +  DK    PL     P     F        L KY                      +  D      +L+   S    +E   +    +RS+LE + EF +       +   + P ++PR +SI+S P  +   + +  A+V  KT   ++ +G+C+ W+KN  P ++          +++S+FK   D   PIIM+ PGTG+AP +  + E      +  EL    LFFGCR ++ D + E
Sbjct:  226 DFKFSSNGLNYLPGDTVSLFPCNFDEDVDALLQ----SQPQWLKI-ADK----PLNLKNFPHLEGGFADILTLRTLFKYHLDIMSIPRRSFFALLWHFVDPSTEDGEREQAKLKEFGSLDEPEELYDYANRPRRSILETLLEFENNLTIPVSYILDLFPLIRPRMFSIASCP--SSKEVELVVAIVEYKTIIRKIRRGVCTRWLKNLKPGDQFL------FSIQRSSFKYKDDNS-PIIMVAPGTGIAPMKSLIDE-VIQNNSKQEL---YLFFGCRFKEKDNLIE 489          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  486 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYE 863
            L PR YSI+SS     S +H+T   V  +   GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+
Sbjct:  385 LTPRLYSIASSQAEVESEVHITVGAVRYEIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQ 501          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: TAH18_YEAST (Probable NADPH reductase TAH18 OS=Saccharomyces cerevisiae GN=TAH18 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 3
Query:  330 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPAD-AKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSL-LFFGCRNRKMDYIYED 866
            + ++LR  A+     +   +    +RS+LEV+ +F S K P   +    +P ++PRYYSISS P      I +T A+V  KT   ++ +G+C+ ++      E+         +  Q+N  +  +    P+I++GPG GLAP          L     E+   + L FGCR +  DYIY+D
Sbjct:  359 QREKLRQFATDQDMQDLYDYCNRPRRSILEVLEDFISVKLPWK-YVLDYLPIIKPRYYSISSGP--GDPNIELTVAIVKYKTILRKIRRGICTNYIARLQEGEQIR-------YKLQNNHIIKKEFLNKPMILVGPGVGLAPL---------LSVVKAEISKDIKLLFGCRYKDKDYIYKD 520          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  486 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYE 863
            L PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+
Sbjct:  383 LTPRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFGNPHFTEDFLYQ 499          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: MTRR_CAEEL (Putative methionine synthase reductase OS=Caenorhabditis elegans GN=tag-165 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.779e-13
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 3
Query:  330 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVH--KGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLP-------ADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTE---LGPSLLFFGCRNRKMDYIY 860
            E  RL  L S  G  ++  ++     SL +++  FP+ KPP+      ++PRL PR YS+SS        I+            GR H  KGL + W+ +    +K       P     + F+LP       +  K+P++M+GPGTG++ F  FL     LK+         P +LFFGCR+  +D IY
Sbjct:  401 EKRRLLELCSAQGMKDFTDFVRTPGLSLADMLFAFPNVKPPVDRLIE-LLPRLIPRPYSMSSYENRKARLIYSEMEF---PATDGRRHSRKGLATDWLNSLRIGDKVQVLGKEP-----ARFRLPPLGMTKNSAGKLPLLMVGPGTGVSVFLSFLHFLRKLKQDSPSDFVDVPRVLFFGCRDSSVDAIY 580          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: TAH18_KLULA (Probable NADPH reductase TAH18 OS=Kluyveromyces lactis GN=TAH18 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12
Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 3
Query:  330 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPAD-AKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYED 866
            + D+LR         +   +    +RS+LEV+ +F   K P   F    +P ++PR+YSISS+P  +   + +T A+V  KT   +V KGLC+ ++   L + +++       +  Q+N  L  D    PIIM  PG GLAP +  ++                LFFG R +  D++YED
Sbjct:  360 QRDKLRQFGYGQDLQDLYDYCNRPRRSVLEVIQDFEFLKLPWE-FALDYLPMIKPRFYSISSAP--SDPNVELTIAIVRYKTLLRKVRKGLCTNYL---LTLTENDTVR----YKLQNNHLLHEDIIGKPIIMTSPGVGLAPMKCLIESNL--------FKDQYLFFGNRMKDKDFLYED 521          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: CYSJ_SALAR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  486 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYE 863
            L PR YSI+SS     + +H+T  +V      GR   G  S+++      ++ +D     +F+  + NF+LP + + PIIMIG GTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+
Sbjct:  383 LTPRLYSIASSQAEVENEVHLTVGVVRYDIE-GRARAGGASSFLA-----DRVDDEGEVRVFIEHNDNFRLPTNPETPIIMIGSGTGIAPFRAFIQQR-AADEAS---GKNWLFFGNPHFTEDFLYQ 499          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: YB63_SCHPO (Uncharacterized FAD-binding protein C12C2.03c OS=Schizosaccharomyces pombe GN=SPBC12C2.03c PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.716e-12
Identity = 72/278 (25.90%), Postives = 121/278 (43.53%), Query Frame = 3
Query:   54 GLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGK-STLPPTFPPCSL---RTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADR--LRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAPIF--VRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIY 860
            G  +  G   GV   N  E V+E L LL ++PD   +    K DG   G+  T+     P  L   R  L K+                       + +R  L  L S  G+  +   +     +L+ ++  FPS + PL      ++P+L PR+YS+S+ P+V+ + +     +V      G    G+ S ++K  +L           P++  + ++ F     +  P+ +IG G G+APFRGF+Q R       T  G   +F GCR++++D +Y
Sbjct:  172 GEEWMVGGSFGVMAPNNEEDVDELLQLLHINPDQADAPVLLKTDG---GRWPTIWAEDTPRELVTTRRELLKWTVEFMSVAPKKQLIRLLAEYAKDDTERQVLLFLVSRLGQRAFCD-LRDHNVTLITLLKAFPSVQLPLD-HLLTVLPQLMPRWYSLSNDPKVSNNVLEFAVTVVEINKVEGGTRSGIGSGFLKRLALRFLNGERDLVLPMYRGLHKNAFATHFASDGPMCLIGAGVGVAPFRGFVQRRLT---NATCAGKVWVFHGCRDQELDELY 441          
BLAST of CF832302 vs. ExPASy Swiss-Prot
Match: TAH18_CANGA (Probable NADPH reductase TAH18 OS=Candida glabrata GN=TAH18 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 49/178 (27.53%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  330 EADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSL-LFFGCRNRKMDYIY 860
            +  +L   A+     E   +    +RS+LEVM +F S + PL  +     P ++PR YSISS+     + I +T A+V  KT   ++  G+C+ ++      +K          ++Q++         P +M+GPG GLAP          L    +++ P + L+FGCR +  DY++
Sbjct:  357 QRQKLYEFATDEDMQELYDYCNRPRRSILEVMEDFLSIRLPLE-YLLDFFPPIKPRLYSISSTANC--NNIELTVAIVKYKTILRKIRTGVCTDFISKLKVGDKIR------YKIQQNDLIKEEYRSNPFVMVGPGVGLAPL---------LSAVRSKVSPEMSLYFGCRFKDKDYLH 516          
The following BLAST results are available for this feature:
BLAST of CF832302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
CYSJ_BUCAI3.040e-1440.94Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_CANAL3.970e-1425.87Probable NADPH reductase TAH18 OS=Candida albicans... [more]
CYSJ_CITK88.845e-1438.58Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
TAH18_YEAST1.155e-1329.83Probable NADPH reductase TAH18 OS=Saccharomyces ce... [more]
CYSJ_SALTI1.155e-1337.80Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
MTRR_CAEEL9.779e-1330.69Putative methionine synthase reductase OS=Caenorha... [more]
TAH18_KLULA1.668e-1230.56Probable NADPH reductase TAH18 OS=Kluyveromyces la... [more]
CYSJ_SALAR2.845e-1237.01Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
YB63_SCHPO3.716e-1225.90Uncharacterized FAD-binding protein C12C2.03c OS=S... [more]
TAH18_CANGA7.008e-1127.53Probable NADPH reductase TAH18 OS=Candida glabrata... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832302 ID=CF832302; Name=CF832302; organism=Citrus sinensis; type=EST; length=866bp
ACTCATCATCTGATCGCTCTTGCACCCATCTAGAATTTCACTTTGCTGGC
ACTGGCCTCACGTATGAAACAGGTGATCATGTTGGTGTTTACTGTGAGAA
TCTATCTGAGACCGTGGAGGAGGCATTGTCATTATTAGGCCTATCACCAG
ACACTTATTTTTCCCTTCATACTGATAAAGAGGATGGCACACCACTTGGT
AAAAGCACCTTGCCTCCCACTTTCCCACCGTGCTCTTTAAGAACAGCATT
AACTAAATATGCTGATCTTTTGAGCTCCCCAAAGAAGTCTGCATTACTTG
CCTTAGCAGCTCATGCATCTGACCCCACTGAAGCAGATCGGTTAAGACAT
CTTGCATCACCTGCTGGAAAGGATGAATATGCACAATGGATTGTTGCAAG
TCAGAGAAGCCTTCTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCC
CACTTGGTGTCTTTTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATAT
TATTCAATTTCATCTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTAC
CTGTGCTCTGGTTTATGAGAAAACACCAACAGGACGTGTTCACAAAGGAT
TGTGCTCCACTTGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGAC
TGCAGCTGGGCACCCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGC
AGATGCTAAAGTGCCTATCATTATGATTGGCCCTGGCACTGGATTAGCTC
CTTTCAGGGGTTTCCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACA
GAACTGGGACCCTCTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGA
TTACATTTATGAGGAT
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