CF832303

Overview
NameCF832303
Unique NameCF832303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:328..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SERP5 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Serratia proteamaculans (strain 568) GN=cysJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  + EGA++YVCGDA  MA+DV  TL  +V E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKDGLLTRIDLAWSRDQQHKVYVQDKLREQGAEVWRWIQEGAHIYVCGDANRMAKDVENTLLELVAEHGGMDTELADEFLSELRLERRYQRDVY 599          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_SALTR (NADPH--cytochrome P450 reductase (Fragments) OS=Salmo trutta PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16
Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = -1
Query:  418 QSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 696
            + GAL++L VAFSRE   K YVQH + +   D+W  + E  A++Y+CGDA+ MARDV    + I +E G +  ++A   +K L   GRY +DVW
Sbjct:  507 KKGALTKLNVAFSREQDQKVYVQHLLRKNKVDLWRQIHEDYAHIYICGDARNMARDVQTAFYEIAEELGGMTRTQATDYIKKLMTKGRYSQDVW 600          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  I  E G L S  AE   + L+   RY +DV+
Sbjct:  510 YLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLAIAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain ANA-3) GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  510 YLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLAVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ZYMMO (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Zymomonas mobilis GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 41/96 (42.71%), Postives = 64/96 (66.67%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+ + +A+SR+   K YVQ K+ EK+ +IW  + E GAYLYVCGDA  MA+DV + L  I++++G +D   A+  +  L++  RY RDV+
Sbjct:  511 YVKQGLLTHIDLAWSRDQAKKVYVQDKLREKAAEIWKWIKEDGAYLYVCGDATHMAKDVDKALIDIIRQEGGMDEEAADEFLTELRLERRYQRDVY 606          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHEON (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella oneidensis GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  513 YLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAKDVHQALLAVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 607          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_KLEP7 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 37/95 (38.95%), Postives = 65/95 (68.42%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV  TL  ++ E G++D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGLLTRIDLAWSRDQQQKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVENTLLEVIAEYGAMDAEAADEFLSELRVERRYQRDVY 599          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHESM (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-4) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  510 YLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQTLWQWLQNGAHLYICGDAERMAKDVHQALLGVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 604          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERE8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 37/95 (38.95%), Postives = 65/95 (68.42%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L++  RY RDV+
Sbjct:  507 YVKDGLLTRIDLAWSRDQADKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRLARRYQRDVY 601          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  524 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 618          
The following BLAST results are available for this feature:
BLAST of CF832303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CYSJ_SERP51.357e-1641.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_SALTR1.772e-1643.62NADPH--cytochrome P450 reductase (Fragments) OS=Sa... [more]
CYSJ_SHESR2.314e-1643.16Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESA3.022e-1642.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ZYMMO3.947e-1642.71Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHEON3.947e-1642.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_KLEP73.947e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHESM5.155e-1642.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERE86.733e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPS8.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832303 ID=CF832303; Name=CF832303; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTCTTTTTAAATGAGAAACCAAACTTGCAGTTTATATTATC
CATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATTG
AACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCCT
AGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACAA
AAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAAA
AGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAATA
GCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATTT
ATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCAG
GATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTTG
CAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGCT
CTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTTG
GCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGAT
ATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGTC
CCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAACA
AA
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