CF832303

Overview
NameCF832303
Unique NameCF832303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:328..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis (strain Pestoides F) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  518 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPN (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  518 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPE (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  512 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  512 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_YERP3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+ +A+  +  L+   RY RDV+
Sbjct:  518 YVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_CITK8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 37/95 (38.95%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  507 YVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANCMAKDVEQALLEVIAEFGGMDAEAADEFLSELRVERRYQRDVY 601
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIFL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri GN=cysJ PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIF8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella flexneri serotype 5b (strain 8401) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIDS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
The following BLAST results are available for this feature:
BLAST of CF832303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CYSJ_YERPP8.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPN8.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPE8.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPA8.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERP38.793e-1638.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_CITK81.148e-1538.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHISS1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIFL1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIF81.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIDS1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832303 ID=CF832303; Name=CF832303; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTCTTTTTAAATGAGAAACCAAACTTGCAGTTTATATTATC
CATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATTG
AACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCCT
AGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACAA
AAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAAA
AGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAATA
GCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATTT
ATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCAG
GATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTTG
CAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGCT
CTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTTG
GCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGAT
ATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGTC
CCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAACA
AA
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