CF832303

Overview
NameCF832303
Unique NameCF832303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:328..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_PHOLL (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Photorhabdus luminescens subsp. laumondii GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 39/95 (41.05%), Postives = 61/95 (64.21%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+   +W  + EGA+LYVCGDA  MA+DV   L  I+ E G +D+ +A+  +  L+   RY RDV+
Sbjct:  506 YVKDGLLTRIDLAWSRDQQHKIYVQDKLREQGEAVWCWIKEGAHLYVCGDANRMAKDVEHALLDIIAEHGGMDTEQADEFLSELRFERRYQRDVY 600
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain K12) GN=cysJ PE=1 SV=4)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLC (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOHS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O9:H4 (strain HS) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO57 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O157:H7 GN=cysJ PE=3 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO24 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 37/95 (38.95%), Postives = 63/95 (66.32%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 37/95 (38.95%), Postives = 63/95 (66.32%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  505 YVKEGGLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_SALAR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 37/95 (38.95%), Postives = 63/95 (66.32%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  505 YVKEGLLSRIDLAWSRDQKEKIYVQDKLRERGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIVEFGGMDLESADEYLSELRVARRYQRDVY 599
[Close]
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOUT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain UTI89 / UPEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 36/95 (37.89%), Postives = 64/95 (67.37%), Query Frame = -1 
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  505 YVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599
The following BLAST results are available for this feature:
BLAST of CF832303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CYSJ_PHOLL1.500e-1541.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOLI1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOLC1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOHS1.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO571.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO241.500e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY1.959e-1538.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB1.959e-1538.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALAR1.959e-1538.95Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOUT1.959e-1537.89Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832303 ID=CF832303; Name=CF832303; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTCTTTTTAAATGAGAAACCAAACTTGCAGTTTATATTATC
CATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATTG
AACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCCT
AGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACAA
AAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAAA
AGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAATA
GCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATTT
ATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCAG
GATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTTG
CAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGCT
CTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTTG
GCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGAT
ATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGTC
CCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAACA
AA
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