CF832326

Overview
NameCF832326
Unique NameCF832326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:950..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.953e-67
Identity = 121/197 (61.42%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  271 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 861
            V +D +   RC + A+QDTLY H+LRQFY    I GTVDFIFGN+A VFQNCDI AR P   Q+NM+TAQGR+D NQNT I IQKC+I A+SDL  VKGS +T+LGRPWK YSRTV+MQS I + I+PAGW+ W G FAL TL+Y EY NTG GADTS RV W  FKVI  + EA+ +T A  I G  WL  TG  F
Sbjct:  357 VSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.094e-64
Identity = 116/201 (57.71%), Postives = 142/201 (70.65%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            VG D +  YRC+++ +QD LYVHS RQF+  C I GTVDFIFGNAA + Q+C+I+AR+P   Q+  +TAQ R DPNQNTGI I  C++ AT DL A KGS+ TYLGRPWK YSR V M SD+ D I+P GW EW+G FALD+L+Y EY N G G+    RVKW  + VITS  EA  +T A FI+GS+WL STG  F  GL
Sbjct:  385 VGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.094e-64
Identity = 115/199 (57.79%), Postives = 140/199 (70.35%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            +DL  FYRC M  +QDTLY HS+RQF+  CII GTVDFIFG+A AVFQ+C I A++  PNQ+N +TAQGR DPN+ TG  IQ   I A +DLL    +  TYLGRPWK YSRTV MQ+ +SD INP GW EW+GNFALDTL+Y EY N+G GA    RVKW  + V+ ++AEA  +T +  I G+ WL STG  F  GL
Sbjct:  327 TDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.429e-64
Identity = 116/200 (58.00%), Postives = 137/200 (68.50%), Query Frame = -1
Query:  259 GSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 858
            G DLS FY C   A+QDTLY HSLRQFY  C + GTVDFIFGNAA V QNC+++ R+P   Q N VTAQGR DPNQNTG  I  C I    DL     + +TYLGRPWK YSRTVVMQ+ I   + P+GW  WSG+FAL TL+YAEY NTG G+DT+NRV W  + VI +A +A  +T  NF+ G  W+G TG PF  GL
Sbjct:  360 GGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.265e-64
Identity = 118/199 (59.30%), Postives = 138/199 (69.35%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            +D S FYRC    +QDTLYVHSLRQFY  C I GT+DFIFGNAAA+FQNC+I+AR+P  NQ+N VTA GR DPNQ TGI I  C IGA  DL A   S  T+LGRPWK YSRTV +QS ISDV+ P GW EW+G   LDT+ Y EY N G GADTS RV+WS + ++ +  +A  +T  NF  G TWL  T  PF  GL
Sbjct:  423 ADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.580e-63
Identity = 115/197 (58.38%), Postives = 143/197 (72.59%), Query Frame = -1
Query:  268 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVK-GSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 855
            SDLS FYRC++  +QDTLY H++RQFY  C I+GTVDFIFG+A  VFQNC I A++  PNQ+N +TAQGR DPN+ TGI IQ C I A SDL A    S  TYLGRPWK YSRTV+MQS +S+VI P GW EW+G+FAL++LFY EY N G GA   +RVKW  ++V   + +A+ YT A FI G+ WL STG  ++
Sbjct:  321 SDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.580e-63
Identity = 117/201 (58.21%), Postives = 144/201 (71.64%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            +G+D +   RC + A+QDTLY H+ RQFY    I GTVDFIFGNAA VFQNC++  R+    Q N +TAQGR DPNQNTG  IQ C I A++DL  V+ +F++YLGRPWK YSRTVVM+S ISDVI+PAGW EW  +FAL TLFY EY+N G G+ TS RVKW  + VITS   A+ +T A  I G +WLGSTG  ++ GL
Sbjct:  343 IGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 242.662 bits (618), Expect = 2.064e-63
Identity = 119/201 (59.20%), Postives = 139/201 (69.15%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            VG+D+S   RC + A+QDTLY HS RQFY    + GTVDFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+SDL  V   F TYLGRPWK YSRTVVM+S +  +INPAGW EW G+FAL TL+Y E+ N G GA TS RVKW  + VIT  A+A  +T A  I G +WL STG  +  GL
Sbjct:  344 VGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.696e-63
Identity = 112/200 (56.00%), Postives = 138/200 (69.00%), Query Frame = -1
Query:  259 GSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 858
            G+D S FY C   A+QDTLY HSLRQFY  C + GTVDFIFGNAA VFQNC+++ R+P PNQ N +TAQGR DPNQNTG  IQ C I    DL++   + +TYLGRPWK YSRTV MQS I   + P GW EW+G+FAL TL+YAEY NTG G++T+NRV W  + VI S  +A  +T       + W+  TG P++ GL
Sbjct:  379 GADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 3.521e-63
Identity = 113/199 (56.78%), Postives = 141/199 (70.85%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            +DLS FY C   A+QDTLY HSLRQFY  C I GTVDFIFGNAA VFQ+C+++ R+P  NQ N +TAQGR DPNQNTGI I  C I    DL++   + +TYLGRPWK YSRTV MQS I +V+ P GW EW+G+FAL TL+YAEY NTG+G+ T++RV W  + VI S  +A  +T  NF+ G  W+  +G P+  GL
Sbjct:  374 ADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
The following BLAST results are available for this feature:
BLAST of CF832326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME18_ARATH8.953e-6761.42Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME61_ARATH1.094e-6457.71Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME32_ARATH1.094e-6457.79Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH1.429e-6458.00Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH9.265e-6459.30Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_PRUPE1.580e-6358.38Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME1_FICAW1.580e-6358.21Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME1_SOLLC2.064e-6359.20Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME7_ARATH2.696e-6356.00Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME41_ARATH3.521e-6356.78Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832326 ID=CF832326; Name=CF832326; organism=Citrus sinensis; type=EST; length=861bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTTAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGAATGCTAGCATGTCACACCTATAGAATGCTGATAAA
TCTGATCCTAC
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