CF832326

Overview
NameCF832326
Unique NameCF832326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.491e-25
Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = -1
Query:  292 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 861
            V  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++++C +H+     N    +TA G+D     TG V   C+I          GS   +LGR W+ Y+R +  ++ +S V++  GW +        T++Y E++  G GA+ S RV   T+  + S  EA  +T  +FI G  WL
Sbjct:  157 VVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRV---TYAKLLSDVEAAPFTNISFIDGEEWL 333          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.889e-24
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = -1
Query:  274 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFP 861
            +G D SAFY       QDTL+    R ++  C I G VDFIFG   +++Q+C I     +  P     +TAQGR +P    G +   C          V G+   +LGRPW+ YSR +   S+++DV+ P GW  W+     + L +AE+   G+GA+   RVKW   K ++ +A  Q     +FI    W+     P
Sbjct:  149 IGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW--VKKLSESA-IQNLADLSFINRGGWVEDLPIP 334          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.208e-24
Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = -1
Query:  370 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWS 861
            V +D  AFY C  L +QDTLY+H  +Q+   C I G+VDFIFGN+ A+ ++C IH +      +  +TAQ R    ++TG V  +C I           S   YLGRPW  + R V+  + +   I   GW+ W       +  + EY+  G G+ +S RV WS
Sbjct:  127 VTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWS 279          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.208e-24
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = -1
Query:  283 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGST 861
            +  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++Q+C I+  A+         +TAQGR   ++ +G     C+I          GS E  LGR W  Y+  V   + +S +I P GW  W  +    T+ + E++  G GAD   RV +   K +T  +EA ++   +FI G  WL  T
Sbjct:  206 IEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHT 388          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.562e-23
Identity = 63/193 (32.64%), Postives = 100/193 (51.81%), Query Frame = -1
Query:  292 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 861
            V +D  AFY C   +  +TL+ +  R +Y  C I G++DFIFG A ++F NC+I     +R  P     +TA  R+   + TG V  + +         V G  E YLGR    YSR +  ++ +S  + P GW  WS + +   L++ EY+  G GA+   R  W+  K +T   E +++ + +FI G++WL
Sbjct:  158 VAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKP--YGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.143e-22
Identity = 60/190 (31.58%), Postives = 90/190 (47.37%), Query Frame = -1
Query:  292 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 861
            + +D +AFY C    FQDTL       F+  C I GT DFIFG  A+++ N  +HA     +   ++TAQGR    +  G     C++  T   +        YLGR W  + + V   ++++ V+NP+GW E        T+FY EY+  G G+    RV ++         E   +    +I GSTWL
Sbjct:  180 INADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVPYTQ---DIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  394 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 855
            +D   +Y C+   +QDTL   +  Q Y +  I G VDFIFG +A A FQN DI      P   + +TA GR      +  VI K  + A       +G++  YLGRPW  Y+R V  Q+ +++VIN  GW EWS +    + + + EY NTGAG++
Sbjct:  147 ADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTGAGSE 298          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20
Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = -1
Query:  394 FYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 840
            +Y C    +QDTL   +  Q Y    I G VDFIFG +A A F  CDI      P+  + +TA GR   + ++  VI K  + A        G++  YLGRPW +Y+R    ++ ++DVIN  GW EWS +    + + + EY NTG GA+
Sbjct:  151 YYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGAE 297          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.072e-19
Identity = 57/190 (30.00%), Postives = 85/190 (44.74%), Query Frame = -1
Query:  292 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 861
            +  D +AFY C    FQDTL       F+ +C I GT DFIFG  A+++    +HA     +   ++ A  R    +  G     C++      +        YLGR W  + + V   +++S V+NP+GW E        T+FY EY  TG G+  + RV  +         EA  +    +I GS WL
Sbjct:  180 INGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA---VGDGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGI--------YLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRVAHTQ---DIDNKEASQFLTLGYIKGSKWL 355          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19
Identity = 63/190 (33.16%), Postives = 89/190 (46.84%), Query Frame = -1
Query:  262 LAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLG 822
            +  QDTL+    R +Y  CII+G +DFIFG   ++F+ C ++         N    +TA  R  P+   G V   C          V G  +T LGR W   +R +  +S +SDV+ P GW  W        L + E   TGAGADTS RV W   K + S +E   + + +FI    W+  + FP   G
Sbjct:  160 VGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW--LKKL-SLSEVDGFASVSFIDQDGWI--SRFPIEGG 335          
The following BLAST results are available for this feature:
BLAST of CF832326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME14_ARATH6.491e-2533.68Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME29_ARATH1.889e-2433.33Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME31_ARATH4.208e-2435.98Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME15_ARATH4.208e-2433.33Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME67_ARATH3.562e-2332.64Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME50_ARATH5.143e-2231.58Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME_ASPAC3.334e-2137.82Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME_ASPTU4.814e-2037.09Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME49_ARATH1.072e-1930.00Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PME66_ARATH1.829e-1933.16Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832326 ID=CF832326; Name=CF832326; organism=Citrus sinensis; type=EST; length=861bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTTAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGAATGCTAGCATGTCACACCTATAGAATGCTGATAAA
TCTGATCCTAC
back to top