CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.793e-71
Identity = 134/216 (62.04%), Postives = 158/216 (73.15%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVK-GSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E VE+ KKK NLM             +R+ VDG TTF SAT AV G GF+ARDITF+NTAGP KHQAVALR  SDLS FYRC++  YQDTLY H++RQFY  C I+GTVDFIFG+A  VFQNC I A++  PNQ+N +TAQGR DPN+ TGI IQ C I A SDL A    S  TYLGRPWK YSRTV+MQS +S+VI P GW EW+G+FAL++
Sbjct:  246 YKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNS 461          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.260e-71
Identity = 131/215 (60.93%), Postives = 153/215 (71.16%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E VE+ KKK N+M             +R+ +DG TTF SAT AV G GF+ARDITFQNTAGP KHQAVA+R  +DL  FYRC M  YQDTLY HS+RQF+  CII GTVDFIFG+A AVFQ+C I A++  PNQ+N +TAQGR DPN+ TG  IQ   I A +DLL    +  TYLGRPWK YSRTV MQ+ +SD INP GW EW+GNFALDT
Sbjct:  252 YVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDT 466          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 261.922 bits (668), Expect = 2.014e-69
Identity = 133/215 (61.86%), Postives = 151/215 (70.23%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E VEV   K+NLM             S NVVDGSTTF SAT+A VG GF+ +DI  QNTAGP+K QAVALRVG+D+S   RC + AYQDTLY HS RQFY    + GTVDFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+SDL  V   F TYLGRPWK YSRTVVM+S +  +INPAGW EW G+FAL T
Sbjct:  271 YKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKT 485          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.435e-69
Identity = 131/215 (60.93%), Postives = 153/215 (71.16%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E VEV  +K+ LM             + NVVDGSTTF+SAT+A VG GF+ +DI  QNTAGP+KHQAVALRVG+D S   RC + AYQDTLY HS RQFY    + GT+DFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+SDL  V   F TYLGRPWK+YSRTVVM+S +  +INPAGW EW G+FAL T
Sbjct:  275 YKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKT 489          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.435e-69
Identity = 132/215 (61.40%), Postives = 156/215 (72.56%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E +E+ KK  N+M             S++V  G+TTFNSATVA VGDGF+AR ITF+NTAG S  QAVALR GSDLS FY+C   AYQDTLYVHS RQFY  C + GTVDFIFGNAAAV QNC+I ARRP  ++ N +TAQGR DPNQNTGI+I   R+ A SDL  V GS +TYLGRPW++YSRTV M++ +  +I+P GW EW GNFAL T
Sbjct:  242 YSENLEIRKK--NVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPR-SKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKT 453          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.487e-69
Identity = 131/215 (60.93%), Postives = 156/215 (72.56%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V+   +K N+M             SRNVVDGSTTF+SATVA VGDGF+A+DI FQNTAGP K+QAVALR+G+D +   RC + AYQDTLY H+ RQFY    I GTVDFIFGNAA VFQNC++  R+    Q N +TAQGR DPNQNTG  IQ C I A++DL  V+ +F++YLGRPWK YSRTVVM+S ISDVI+PAGW EW  +FAL T
Sbjct:  270 YEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKT 484          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 9.995e-69
Identity = 128/215 (59.53%), Postives = 150/215 (69.77%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V +  KK N+M             + + +DG TT+NS+T AVVGD F+A D+TF+NTAGP KHQAVA+R  +D S FYRC    YQDTLYVHSLRQFY  C I GT+DFIFGNAAA+FQNC+I+AR+P  NQ+N VTA GR DPNQ TGI I  C IGA  DL A   S  T+LGRPWK YSRTV +QS ISDV+ P GW EW+G   LDT
Sbjct:  348 YEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDT 562          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.305e-68
Identity = 130/215 (60.47%), Postives = 153/215 (71.16%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E VEV  +K+NLM             S NVVDGSTTF+SAT+A VG GF+ +DI  QNTAGP+KHQAVALRVG+D S   RC + AYQDTLY HS RQFY    + GT+DFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   F TYLGRPWK+YSRTVVM+S +  +I+P+GW EW G+FAL T
Sbjct:  275 YKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKT 489          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 2.908e-68
Identity = 128/215 (59.53%), Postives = 150/215 (69.77%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E + VP  K NLM             + NVVDG TT+N ++ AVVG+ F+A D+TF+NTAGP KHQAVALR  ++ S+FYRC    YQDTLYVHSLRQFY  C I GTVDFIFGNAAA+FQNC+I+AR+P   Q+N +TA GR DPNQNTGI I  C I A  DL A   S  T+LGRPWK YSRTV MQS ISD++ P GW EW+G   LDT
Sbjct:  343 YEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDT 557          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.960e-68
Identity = 125/215 (58.14%), Postives = 147/215 (68.37%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E + + K K  +M             +R+VVDG TTFNSAT AV    F+A +ITF+NTAGP KHQAVALR G+D S FY C   AYQDTLY HSLRQFY  C + GTVDFIFGNAA VFQNC+++ R+P PNQ N +TAQGR DPNQNTG  IQ C I    DL++   + +TYLGRPWK YSRTV MQS I   + P GW EW+G+FAL T
Sbjct:  305 YEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALST 519          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_PRUPE4.793e-7162.04Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME32_ARATH6.260e-7160.93Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_SOLLC2.014e-6961.86Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC3.435e-6960.93Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME17_ARATH3.435e-6961.40Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME1_FICAW4.487e-6960.93Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME47_ARATH9.995e-6959.53Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_SOLLC1.305e-6860.47Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME25_ARATH2.908e-6859.53Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME7_ARATH4.960e-6858.14Probable pectinesterase/pectinesterase inhibitor 7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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