CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 2.462e-67
Identity = 126/215 (58.60%), Postives = 148/215 (68.84%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V + K K  LM             +RNVVDG TTFNSAT AV    F+A ++TF+NTAGP KHQAVA+R  +DLS FY C   AYQDTLY HSLRQFY  C I GTVDFIFGNAA VFQ+C+++ R+P  NQ N +TAQGR DPNQNTGI I  C I    DL++   + +TYLGRPWK YSRTV MQS I +V+ P GW EW+G+FAL T
Sbjct:  299 YEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALST 513          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.215e-67
Identity = 125/215 (58.14%), Postives = 150/215 (69.77%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E VE+ KKK N++             +R+ +DG TTF SAT AV G GFLARDITFQNTAGP KHQAVALR  SDLS F+RC M  YQDTLY H++RQFY  C I GTVDFIFG+   VFQNC I A+R  PNQ+N +TAQGR D NQ +G  IQ   I A +DL+    +  TYLGRPWK YSRTV +++++SDV+ P GW EW+ +FALDT
Sbjct:  250 YLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDT 464          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.596e-66
Identity = 130/215 (60.47%), Postives = 151/215 (70.23%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E V V KKK+NLM             S NVVDGST F S T+A VG GF+ +DI  QNTAGP K QAVALRVG+D+S   RC + AYQDTLY HS RQFY    + GTVDFIFGNAA VFQ C I AR+PN  Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   ++TYLGRPWK++SRTVVMQS +   I+P+GW+EW G+FAL T
Sbjct:  270 YKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGST-FPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKT 483          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.722e-66
Identity = 120/213 (56.34%), Postives = 151/213 (70.89%), Query Frame = 2
Query:    8 EPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            E ++V +KK NLMF             +++ D  TTF++AT A  G GF+ RD+TF+N AGP+KHQAVALRVG D +  YRC+++ YQD LYVHS RQF+  C I GTVDFIFGNAA + Q+C+I+AR+P   Q+  +TAQ R DPNQNTGI I  C++ AT DL A KGS+ TYLGRPWK YSR V M SD+ D I+P GW EW+G FALD+
Sbjct:  314 ENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDS 526          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 7.920e-66
Identity = 118/215 (54.88%), Postives = 156/215 (72.56%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E +E+P++K  +MF            +R+  DG T F+SATV V G GF+A+D++F N AGP KHQAVALR  SDLSA+YRC   +YQDT+YVHS +QFY  C I GTVDFIFG+A+ VFQNC ++ARRPNPNQ+ + TAQGR++  + TGI I   RI A  DL+ V+ +F+ YLGRPW+ YSRTV+M+S I D+++PAGW +W  +FAL+T
Sbjct:  245 YFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALET 459          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.133e-65
Identity = 120/211 (56.87%), Postives = 149/211 (70.62%), Query Frame = 2
Query:   14 VEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            ++V +KKINLMF             +++ D  TTF++A+ A  G GF+ARDITF+N AGP+KHQAVALR+G+D +  YRC+++ YQDTLYVHS RQF+  C I GTVDFIFGNAA V QNC I+AR+P   Q+N +TAQ R DPNQNTGI I   R+ A SDL A  GS +TYLGRPWK +SRTV M S I   ++  GW EW+  FALDT
Sbjct:  327 LKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDT 537          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.951e-64
Identity = 123/215 (57.21%), Postives = 142/215 (66.05%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E VEVPK K  +M             +R+VVDG TTFNSAT  + G  F+  +IT +NTAGP+K QAVALR G DLS FY C   AYQDTLY HSLRQFY  C + GTVDFIFGNAA V QNC+++ R+P   Q N VTAQGR DPNQNTG  I  C I    DL     + +TYLGRPWK YSRTVVMQ+ I   + P+GW  WSG+FAL T
Sbjct:  286 YEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALST 500          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.676e-64
Identity = 123/215 (57.21%), Postives = 143/215 (66.51%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E +++ KKK N+M              RN + G TTF +ATVAV G GF+A+DITF+NTAGP   QAVALRV SD SAFYRC +  YQDTLY HSLRQFY  C I GT+DFIFGN AAV QNC I+ R P P Q+  +TAQGR  PNQNTG VIQ   + AT           TYLGRPWK YSRTV M + +S ++ P GW EW GNFALDT
Sbjct:  278 YKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDT 483          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.805e-63
Identity = 118/215 (54.88%), Postives = 152/215 (70.70%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E VE+PKKK  +MF            +R+ +DG +TF + TV V G G++A+DI+F N+AGP+K QAVA R GSD SAFYRC+   YQDTLYVHS +QFY  C I GT+DFIFGNAA VFQN  ++AR+PNP  +   TAQ R+  +Q TGI I  CRI A  DL+ VK +F+ YLGRPW++YSRTV+++S I D+I+PAGW E   +FAL+T
Sbjct:  259 YFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALET 473          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.873e-61
Identity = 119/213 (55.87%), Postives = 141/213 (66.20%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFAL 640
            Y E + +P K+ N+M             SR+   G TT+ +ATVA +G+GF+ARD+TF N AGP   QAVALRVG+D S  +RC +  YQD+LY HS RQFY    I GTVDFIFGN+A VFQ+C+I AR+P P QRN VTAQGR +P QNTGI IQ CRI A S          TYLGRPWK YSRTVVMQS I   I+P+GW  WSG F L
Sbjct:  252 YHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGL 455          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME41_ARATH2.462e-6758.60Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME44_ARATH3.215e-6758.14Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_SOLLC1.596e-6660.47Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME61_ARATH2.722e-6656.34Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME40_ARATH7.920e-6654.88Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME34_ARATH5.133e-6556.87Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH1.951e-6457.21Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH5.676e-6457.21Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME39_ARATH4.805e-6354.88Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME16_ARATH5.873e-6155.87Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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