CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.915e-60
Identity = 115/215 (53.49%), Postives = 142/215 (66.05%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V V K K N++               N +DG+ TF +AT AV G GF+ARD+ F NTAGP+KHQAVAL V +DLS FY+C M A+QDT+Y H+ RQFY  C+I GTVDFIFGNAA VFQ C+I  RRP   Q+N +TAQGR DPNQNTGI I  C I    +L  +    +T+LGRPWK +S TV+M+S +   INP GW  W+G+ A DT
Sbjct:  295 YLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDI----QTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDT 505          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.481e-60
Identity = 113/215 (52.56%), Postives = 143/215 (66.51%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            YRE V + K   N+M             +RNV DG+TTF SAT AV G+GF+A+ ITF+NTAGP KHQAVALR  SD S FY C    YQDTLY+HS RQF  +C I GTVDFIFG+A A+ QNC+I+AR+P   Q+N +TAQ R +P++ TG VIQ   +   S         ETYLGRPW+ +SRTV M+ ++  +++PAGW  WSG+FAL T
Sbjct:  290 YRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATAS---------ETYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALST 495          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.481e-60
Identity = 118/215 (54.88%), Postives = 142/215 (66.05%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V+V KK  N++               NV+DG+ TF +AT AV G GF+ARD+ F NTAGPSKHQAVAL V +DL+AFYRC M AYQDTLYVH+ RQFY  C I GTVDFIFGN+A+V Q+C I  RRP   Q+N +TAQGR DPN NTGI I +C I    DL  V     T+LGRPWK +S TV+M S +   I+  GW  W+G+ A DT
Sbjct:  293 YFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDT 503          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.108e-59
Identity = 111/215 (51.63%), Postives = 143/215 (66.51%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E V+V +   +L+F            S++  DG TT+ +ATVA+VGD F+A++I F+NTAG  KHQAVA+RV +D S FY C    YQDTLY HS RQFY  C I+GT+DF+FG+AAAVFQNC +  R+P  NQ   +TA GR DP ++TG V+Q C I    D LAVK   +TYLGRPWK YSRT++M + I D + P GW  W G F L+T
Sbjct:  290 YKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNT 504          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.889e-59
Identity = 110/215 (51.16%), Postives = 143/215 (66.51%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E V+V K   +L+F            ++N  DG TT+ +ATVA+VG+ F+A++I F+NTAG  KHQAVA+RV SD S F+ C    YQDTLY HS RQF+  C I+GT+DF+FG+AAAVFQNC +  R+P PNQ   +TA GR DP ++TG V Q C I    D LAVK + + YLGRPWK YSRT++M + I D + P GW  W G+F L T
Sbjct:  293 YKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKT 507          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.889e-59
Identity = 112/215 (52.09%), Postives = 145/215 (67.44%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E +++P  K N++             +R+V DG TTF SAT+AV G+GFLARDI   NTAGP KHQAVALRV +D  A YRC +  YQDTLY HS RQFY  C I GT+D+IFGNAA VFQ C+I ++ P P Q  ++TAQ RD  +++TGI +Q C I A+ DL       ++YLGRPW+ +SRTVVM+S I + I+ +GW +W+G  ALDT
Sbjct:  275 YDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDT 489          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.468e-59
Identity = 120/215 (55.81%), Postives = 145/215 (67.44%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E + +P K+ N+M             SR+   G  T+ SATVA +GDGF+ARDITF N+AGP+  QAVALRVGSD S  YRC +  YQD+LY  S RQFY    I GTVDFIFGN+A VFQ+C++ +R+ + +Q N VTAQGR DPNQNTGI I  CRI          GS +TYLGRPWK+YSRTVVMQS I   I+P+GW  WS NFAL T
Sbjct:  265 YKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKT 469          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.223e-59
Identity = 115/210 (54.76%), Postives = 137/210 (65.24%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGN 631
            Y E +++ K   N+M             SRN +DG+ TF +AT AV G GF+A+DI F N AG SKHQAVALR GSD S F+RC    +QDTLY HS RQFY  C I GT+DFIFGNAA VFQ+C I  R+P PNQ N +TAQG+ DPNQNTGI+IQK  I    + L       TYLGRPWK +S TV+MQSDI  ++NP GW  W  N
Sbjct:  311 YVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGNNLTA----PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPN 516          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.016e-57
Identity = 108/216 (50.00%), Postives = 142/216 (65.74%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST-TFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V+V KK  ++ F            S N   G   T+ +ATVA+ GD F A++I F+NTAGP  HQAVALRV +DL+ FY C +  YQDTLYVHS RQF+  C ++GTVDFIFG+   V QNC+I  R+P  +Q  M+TAQGR D  ++TG+V+Q C I      + VK   + YLGRPWK +SRT++M + I DVI+PAGW  W+G+FAL+T
Sbjct:  297 YNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNT 512          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.940e-57
Identity = 115/217 (53.00%), Postives = 141/217 (64.98%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDT 646
            Y+E + V     ++M              R+V  G TT+NSAT  + G  F+A+ ITF+NTAGP+K QAVALR  SDLS FY+C +  YQDTL VHS RQFY  C I GTVDFIFGNAAAVFQNC I  RRP   Q N++TAQGR DP QNTGI I   RI    DL  V G+ +TY+GRPW ++SRTVV+Q+ + +V++P GW  W     F LDT
Sbjct:  261 YQENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDT 477          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME46_ARATH2.915e-6053.49Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME6_ARATH8.481e-6052.56Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME24_ARATH8.481e-6054.88Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME28_ARATH1.108e-5951.63Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME21_ARATH1.889e-5951.16Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH1.889e-5952.09Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME35_ARATH2.468e-5955.81Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_PHAVU3.223e-5954.76Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME58_ARATH3.016e-5750.00Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME59_ARATH3.940e-5753.00Probable pectinesterase/pectinesterase inhibitor 5... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
back to top