CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 103/216 (47.69%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST-TFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E V V KK  ++ F            S N   G   TF +AT+ + GD F A++I  +NTAGP   QAVALRV +D + F+ C +  +QDTLYVHS RQFY  C ++GTVDFIFG+A  + QNC I  R+PN  Q  MVTAQGR +  ++TG+V+  C I      + +K   + YLGRPWK +SRT++M++ I DVI+PAGW  WSG+FAL T
Sbjct:  295 YKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKT 510          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.237e-52
Identity = 112/216 (51.85%), Postives = 133/216 (61.57%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRI-GATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V V  K  N+M              ++   G +T+ SAT    GDGF+ RDIT +NTAGP  HQAVALR  SD+S FYRC +  YQDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC I AR P PN  N +TAQ R +PNQ TGIVI    + GA    L   G  +TYLGRPW+ Y+RTVV+ + +  +I P GW +W    AL T
Sbjct:  204 YEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL---GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALST 415          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 108/225 (48.00%), Postives = 135/225 (60.00%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVD-GSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI-----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V VP +K N++F            S NV   G TTF SATV V+GDGF+ARD+T +NTAG   HQAVA R  SD S    C+ L  QDTLY HSLRQFY  C I G VDFIFGN+AAVFQ+CDI     H++       N +TA GR D +Q+TG V   C I  T + +    A     + +LGRPWK +SRTV +  ++  +I+P GW  W+G+FAL T
Sbjct:  329 YEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKT 553          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 98/184 (53.26%), Postives = 123/184 (66.85%), Query Frame = 2
Query:  104 GSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPN-PNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDT 646
            G++  ++AT+ V GDGF+ARDI  +N AGP  HQA+AL + SD S  YRC +  YQDTLY  +LRQFY  C I GT+DFIFGNAAAVFQ+C+I  RRP+     N++ A GR D  QNTG  +  CRI   SDL  VK  + +YLGRPW++YSR +VM+S I D I   GW  W  SG+  L T
Sbjct:  269 GTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKT 452          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49
Identity = 104/215 (48.37%), Postives = 129/215 (60.00%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V +   K NL              + +  +   TFN+ATVA  G+GF+  D+ F+NTAGP+K  AVALRV  D+S  YRC +  YQD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQKC I A+SDL     + +TYLGRPW+ +S   VMQS I D+++PAGW  W G   L T
Sbjct:  253 YDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLST 465          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48
Identity = 101/215 (46.98%), Postives = 128/215 (59.53%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V +   K NL              + +  +   T+N+ATVA  G+GF+  D+ F+NTAGP+K  AVALRV  D+S  YRC +  YQD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQ C I  +SDL     + +TYLGRPW+R+S   V+QS I D+++PAGW  W G   L T
Sbjct:  226 YDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDL--DTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLST 438          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 100/215 (46.51%), Postives = 125/215 (58.14%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V +   K NL              + +  +   TF +AT A  G GF+  D+ F+NT GP+K  AVALRV  D+S  YRC +  YQD LY H  RQFY  C I GTVDFI GNAAAVFQ C I AR+PN  Q N +TAQ R+  +  +G  IQ C I A+SDL     + +TYLGRPW+ +S   V+QS I D+++PAGW  W G   L T
Sbjct:  253 YDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDL--DTATVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLST 465          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.189e-45
Identity = 99/212 (46.70%), Postives = 128/212 (60.38%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVV--DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDP-NQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSG 628
            YRE V +PKKK N+              +R+V    G+TT  S TV V  +GF+A+ I F+NTAGP  HQAVA+RV  D +  + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ N  Q N VTA G +       GIV+Q CRI     L A +   E+YLGRPWK++S TV++ S+I DVI P GW  W G
Sbjct:  321 YREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDG 532          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.028e-45
Identity = 96/212 (45.28%), Postives = 129/212 (60.85%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVV--DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRD-DPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSG 628
            Y E V +PKKK N+               R+V    G+TT  S TV V  +GF+A+ I F+NTAGP  HQAVALRV  D +  + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI    +L A K + ++YLGRPWK+++ TV++ ++I D+I P GW EW G
Sbjct:  314 YNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQG 525          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45
Identity = 95/212 (44.81%), Postives = 128/212 (60.38%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVV--DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRD-DPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSG 628
            YRE V +PKKK N+              +R+V    G+TT  SATV V  +GF+A+ + F+NTAGP  HQA A+RV  D +  + C    YQDTLYV++ RQFY +C+++GTVDFIFG +A V QN  I  R+ +  Q N VTA G +       GIV+Q CRI     L   + +  TYLGRPWK++S TV+M +++ D+I P GW  W G
Sbjct:  314 YREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDG 525          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME23_ARATH1.004e-5247.69Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH2.237e-5251.85Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME64_ARATH2.922e-5248.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME54_ARATH4.664e-5053.26Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME19_ARATH5.157e-4948.37Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME30_ARATH1.501e-4846.98Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME42_ARATH2.167e-4746.51Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME5_ARATH1.189e-4546.70Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME37_ARATH2.028e-4545.28Probable pectinesterase/pectinesterase inhibitor V... [more]
PME4_ARATH4.518e-4544.81Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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