CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.995e-44
Identity = 93/215 (43.26%), Postives = 122/215 (56.74%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E V V K+   +              S N  DG  T+N+AT  V G  F+A+DI F+NTAG  KHQAVALRV +D + FY C M  +QDTLYV S RQFY  C I+GT+DF+FG    VFQNC +  R P   Q+ +VTA GR+  N  + +V Q         L +V     +YLGRPWK+YS+ V+M S I  +  P G+  W G+   +T
Sbjct:  169 YKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKET 382          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.995e-44
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNV--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSG 628
            Y+E V +PKK  N+               R+V    G+TT  S TV V  +GF+A+ I FQNTAGP  HQAVA RV  D +  + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G
Sbjct:  310 YKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQG 521          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.580e-42
Identity = 93/212 (43.87%), Postives = 126/212 (59.43%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNV--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSG 628
            Y+E V +PKK  N+               R+V    G+TT  S TV V  +GF+A+ I FQNTAGP  +QAVA RV  D +  + C    YQDTLYV++ RQFY + +++GTVDFI G +A V QN  I  R+ +P Q N VTA G+        GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G
Sbjct:  297 YKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQG 508          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.838e-33
Identity = 78/217 (35.94%), Postives = 111/217 (51.15%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNV----------VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            YR+PV VPK+K  + F            +             V G+ TF   +V V G+ F+A +ITF+N+A     QAVA+RV +D  AFY C  L +QDTLY+H  +Q+   C I G+VDFIFGN+ A+ ++C IH +      +  +TAQ R    ++TG V  +C I           S   YLGRPW  + R V+  + +   I   GW+ W
Sbjct:   44 YRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNW 249          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31
Identity = 75/175 (42.86%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  113 TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            T+NSA+ AV    F+A++ITF+NT      G    QAVALRV +D +AF+ C ML  QDTLY H  R +Y  C I G+VDFIFGNA ++++ C +HA     ++   VTAQGR    ++TG    KC++  T  L         YLGR W  +SR V   + + ++I P GWY W
Sbjct:  166 TYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNW 328          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30
Identity = 81/219 (36.99%), Postives = 109/219 (49.77%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNV------VDGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            YRE V VPK K  + F            S +        DG    T+ +A+V++  D F A  ITF+NT    AG    QAVALR+  D + FYR  +L  QDTL+  +   ++  C I G VDFIFGNA +++Q+CDIH+      +   + A  RD   ++TG     C I  T  +         YLGR W  YSRTV     I+D+I P GW +W
Sbjct:  119 YREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDW 325          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29
Identity = 76/214 (35.51%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI--HARRPNPNQR---NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 613
            Y E V +PK K N+              +      + TF  ATV V G  F+A++I+F N A     G    QAVA+R+  D SAF  C     QDTL+    R ++  C I G++DFIFGNA +++Q+C I   A + +P  +     VTA GR   ++N+G     C IG T            +LGR W+ YSR V + + ++DVI P GW
Sbjct:  128 YYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTG---------HVWLGRAWRPYSRVVFVSTTMTDVIAPEGW 332          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            YRE V +P +K  +              S    DG     S T+ +    F+ R +T QN  G +  +AVALRV +D +AFY C + +YQDTL   +   ++ +C I G  DFI G+A+++++ C +H+  PN      +TAQ R    + +G     C++          GS  T+LGRPW  YSR V   S  S+V+ P GW +W
Sbjct:   90 YREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27
Identity = 72/209 (34.45%), Postives = 106/209 (50.72%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 613
            YRE   V + K NL+             +      + TF+S +VAV G+ F A +I+F+NTA     G    QAVAL+V  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++++C +H+     N    +TA G+D     TG V   C+I          GS   +LGR W+ Y+R +  ++ +S V++  GW
Sbjct:   79 YRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGW 277          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.697e-26
Identity = 71/214 (33.18%), Postives = 100/214 (46.73%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            YRE V V + K NL+             +        T +S +  V    F A +I+F+N A     G +  QAVALR+  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++Q+C I+  A+         +TAQGR   ++ +G     C+I          GS E  LGR W  Y+  V   + +S +I P GW  W
Sbjct:  128 YREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 332          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_MEDSA4.995e-4443.26Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME_BRANA4.995e-4444.81Probable pectinesterase/pectinesterase inhibitor O... [more]
PME_BRACM3.580e-4243.87Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME31_ARATH8.838e-3335.94Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME53_ARATH1.667e-3142.86Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME62_ARATH5.362e-3036.99Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME8_ARATH7.742e-2935.51Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME11_ARATH1.907e-2733.82Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME14_ARATH2.491e-2734.45Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME15_ARATH4.697e-2633.18Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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