CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.858e-25
Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 625
            YRE + +P+KK  ++                  D ++   S T A + D  + + ITF N+   PS  +        AVA  +G D SAFY       QDTL+    R ++  C I G VDFI G+  +++Q+C I     +  P     +TAQGR + N   G V   C          V G  + YLGR W+ YSR +   S+++DV++P GW+EW+
Sbjct:   66 YREKITIPQKKPFIVIVGAGKRSTRVEWD----DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWN 271          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.279e-23
Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  101 DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 625
            D + TF +  V     G    ++   NT G + HQA+AL   +D   +Y C+   YQDTL   +  Q Y +  I G VDFIFG +A A FQN DI      P   + +TA GR      +  VI K  + A       +G++  YLGRPW  Y+R V  Q+ +++VIN  GW EWS
Sbjct:  110 DLTATFRNKAV-----GSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWS 276          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.671e-23
Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 625
            YRE +++P +K  ++                  D  +   S T + + D  + + ITF N+   PSK +        AVA  +G D SAFY       QDTL+    R ++  C I G VDFIFG   +++Q+C I     +  P     +TAQGR +P    G +   C          V G+   +LGRPW+ YSR +   S+++DV+ P GW  W+
Sbjct:   71 YREKIKIPYEKPFIVLVGAGKRLTRVEWD----DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWN 276          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.847e-22
Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  122 SATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 625
            +AT+    +G    ++   NT G + HQA+A+   +    +Y C    YQDTL   +  Q Y    I G VDFIFG +A A F  CDI      P+  + +TA GR   + ++  VI K  + A        G++  YLGRPW +Y+R    ++ ++DVIN  GW EWS
Sbjct:  111 TATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWS 275          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.374e-22
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  113 TFNSATVAVVGDGFLARDITFQNTAGP----SKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 619
            T  SAT+ V  + F A  +T +NTA      S+ QA+A+R+ +D +AFY C    +QDTL       F+  C I GT DFIFG  A+++ N  +HA     +   ++TAQGR    +  G     C++  T   +        YLGR W  + + V   ++++ V+NP+GW E
Sbjct:  140 TVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRE 301          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.564e-21
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  206 AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            AVA+ V  D SAFY CD L  QDT++ +  R  + +C I G +DFIFG+  +V+++C I+A      +      +TAQGR   +  +G V  +          +V GS   YLGR +  +SR + +Q+D+S V++P GWY W
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSW 233          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.564e-21
Identity = 64/183 (34.97%), Postives = 85/183 (46.45%), Query Frame = 2
Query:  101 DGSTTFNSATVAVVGDGFLARDITFQN------TAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            D   T  SAT        +   ITF+N      ++ P+K    A+ +G D  A        +QDTLY    R +Y  C+I+G +DFIFG A ++F+ C +  R    P       +TAQGRD P    G V + C          V GS +  LGR WK YSR +  +S  SD I P GW  W
Sbjct:  107 DHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC---------TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAW 279          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.483e-21
Identity = 66/218 (30.28%), Postives = 99/218 (45.41%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST------TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            YRE V VP  K  + F                 D         T+ +A+V V  + F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R ++  C I G++DFIFGN  +++++C++H+     ++   + A GR  P + TG     CR+  T  L         Y+GR   +YSR V   +    ++   GW +W
Sbjct:   98 YREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPL---------YVGRAMGQYSRIVYAYTYFDALVAHGGWDDW 303          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20
Identity = 68/216 (31.48%), Postives = 103/216 (47.69%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-----PSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 625
            Y+E V +P+ K  +              S++ VD      SAT  V  + F+A  I+ +N A       S++Q+VA  V +D  AFY C   +  +TL+ +  R +Y  C I G++DFIFG A ++F NC+I     +R  P     +TA  R+   + TG V  + +         V G  E YLGR    YSR +  ++ +S  + P GW  WS
Sbjct:   83 YKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKP--YGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWS 284          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.580e-20
Identity = 55/127 (43.31%), Postives = 66/127 (51.97%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI 382
            Y E V +   K NL              + +  +   TFN+AT A  GDGF+  D+ F+NT  P K   V LRV  D+S  YRC +  YQD LY H  RQ Y    +  TVDFI GNAAAVFQ C I
Sbjct:  115 YVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME55_ARATH8.858e-2531.96Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.279e-2337.50Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME29_ARATH1.671e-2331.05Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME_ASPTU1.847e-2235.50Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME50_ARATH5.374e-2234.10Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME52_ARATH1.564e-2137.32Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME10_ARATH1.564e-2134.97Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME68_ARATH3.483e-2130.28Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME67_ARATH1.014e-2031.48Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME57_ARATH8.580e-2043.31Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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