CF832327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 2 Query: 113 TFNSATVAVVGDGFLARDITFQNTAGPSKH----QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 619 T SAT+ V FLA ++ NT+ K QA+A+R+ D +AFY C +QDTL F+ +C I GT DFIFG A+++ +HA + ++ A R + G C++ + YLGR W + + V +++S V+NP+GW E Sbjct: 140 TVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA---VGDGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGI--------YLGRAWMSHPKVVYSYTEMSSVVNPSGWQE 301
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.149e-18 Identity = 53/174 (30.46%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 113 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 619 T +SAT+ V+ D F+A +I +N+A G K QA+++R+ + +AFY C YQDT+ + F+ C I GT DFIFG+ +++ ++ + ++TA + +G C++ T + YLGR W + + V +D+S V+NP+GW E Sbjct: 116 TVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNV---VGDGIRVITAHAGKSAAEKSGYSFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQE 278
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.337e-17 Identity = 48/174 (27.59%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 113 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 619 T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H + ++ A + +G C++ T + YLGR W + + V ++++ V+NP GW E Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.337e-17 Identity = 48/174 (27.59%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 113 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYE 619 T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H + ++ A + +G C++ T + YLGR W + + V ++++ V+NP GW E Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 65/216 (30.09%), Postives = 91/216 (42.13%), Query Frame = 2 Query: 2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG--PSKHQ----AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622 YRE V +PK+K + D T SAT D + ITF+NT P+ + AVA R+ D + QDTL+ R +Y CII+G +DFIFG ++F+ C ++ N +TA R P+ G V C V G +T LGR W +R + +S +SDV+ P GW W Sbjct: 72 YREKVTIPKEKGFIYLQGKGIEQTVIEYD----DHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAW 274
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 101 DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPW 547 DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI R+ SD + K LGRPW Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAK---SYGLGRPW 269
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 101 DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPW 547 DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI R+ SD + K LGRPW Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAK---SYGLGRPW 269 The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bpback to top |