CF832328

Overview
NameCF832328
Unique NameCF832328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:974..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.006e-64
Identity = 113/193 (58.55%), Postives = 140/193 (72.54%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC    YQDTL+ HSLRQFY    I GT+DFIFG+AAAVFQNCDI  RRP  +Q NM+TAQGRDDP+ N+GI IQ  RI A  +  AVKG F++YLGRPWK+YSRTV +++DI ++I+P GW EWSG++AL TL+Y E+ NTGAGA T  RV W  F V+    EA  +T + FI G +W+  TG PFS G+
Sbjct:  327 YRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.165e-63
Identity = 114/193 (59.07%), Postives = 138/193 (71.50%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC+++ YQD LYVHS RQF+  C I GTVDFIFGNAA + Q+C+I+AR+P   Q+  +TAQ R DPNQNTGI I  C++ AT DL A KGS+ TYLGRPWK YSR V M SD+ D I+P GW EW+G FALD+L+Y EY N G G+    RVKW  + VITS  EA  +T A FI+GS+WL STG  F  GL
Sbjct:  393 YRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.391e-63
Identity = 113/193 (58.55%), Postives = 136/193 (70.47%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC M  YQDTLY HS+RQF+  CII GTVDFIFG+A AVFQ+C I A++  PNQ+N +TAQGR DPN+ TG  IQ   I A +DLL    +  TYLGRPWK YSRTV MQ+ +SD INP GW EW+GNFALDTL+Y EY N+G GA    RVKW  + V+ ++AEA  +T +  I G+ WL STG  F  GL
Sbjct:  333 YRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.866e-63
Identity = 116/193 (60.10%), Postives = 134/193 (69.43%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC    YQDTLYVHSLRQFY  C I GT+DFIFGNAAA+FQNC+I+AR+P  NQ+N VTA GR DPNQ TGI I  C IGA  DL A   S  T+LGRPWK YSRTV +QS ISDV+ P GW EW+G   LDT+ Y EY N G GADTS RV+WS + ++ +  +A  +T  NF  G TWL  T  PF  GL
Sbjct:  429 YRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.289e-62
Identity = 116/192 (60.42%), Postives = 139/192 (72.40%), Query Frame = -1
Query:  259 RCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 834
            RC + AYQDTLY H+ RQFY    I GTVDFIFGNAA VFQNC++  R+    Q N +TAQGR DPNQNTG  IQ C I A++DL  V+ +F++YLGRPWK YSRTVVM+S ISDVI+PAGW EW  +FAL TLFY EY+N G G+ TS RVKW  + VITS   A+ +T A  I G +WLGSTG  ++ GL
Sbjct:  352 RCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.897e-62
Identity = 112/193 (58.03%), Postives = 132/193 (68.39%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            Y C   AYQDTLY HSLRQFY  C + GTVDFIFGNAA V QNC+++ R+P   Q N VTAQGR DPNQNTG  I  C I    DL     + +TYLGRPWK YSRTVVMQ+ I   + P+GW  WSG+FAL TL+YAEY NTG G+DT+NRV W  + VI +A +A  +T  NF+ G  W+G TG PF  GL
Sbjct:  367 YSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.395e-62
Identity = 114/193 (59.07%), Postives = 134/193 (69.43%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC    YQDTLYVHSLRQFY  C I GTVDFIFGNAAA+FQNC+I+AR+P   Q+N +TA GR DPNQNTGI I  C I A  DL A   S  T+LGRPWK YSRTV MQS ISD++ P GW EW+G   LDT++Y EY N G GA+T+ RV+W  + ++ + AEA  +T  NF  G TWL  T  PF  GL
Sbjct:  424 YRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 236.113 bits (601), Expect = 1.861e-61
Identity = 116/192 (60.42%), Postives = 133/192 (69.27%), Query Frame = -1
Query:  259 RCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 834
            RC + AYQDTLY HS RQFY    + GTVDFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+SDL  V   F TYLGRPWK YSRTVVM+S +  +INPAGW EW G+FAL TL+Y E+ N G GA TS RVKW  + VIT  A+A  +T A  I G +WL STG  +  GL
Sbjct:  353 RCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 2.430e-61
Identity = 110/193 (56.99%), Postives = 136/193 (70.47%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            Y C   AYQDTLY HSLRQFY  C I GTVDFIFGNAA VFQ+C+++ R+P  NQ N +TAQGR DPNQNTGI I  C I    DL++   + +TYLGRPWK YSRTV MQS I +V+ P GW EW+G+FAL TL+YAEY NTG+G+ T++RV W  + VI S  +A  +T  NF+ G  W+  +G P+  GL
Sbjct:  380 YSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.430e-61
Identity = 115/192 (59.90%), Postives = 133/192 (69.27%), Query Frame = -1
Query:  259 RCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 834
            RC + AYQDTLY HS RQFY    + GT+DFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+SDL  V   F TYLGRPWK+YSRTVVM+S +  +INPAGW EW G+FAL TL+Y E+ N G GA TS RVKW  +  IT  AEA  +T A  I G +WL STG  +  GL
Sbjct:  357 RCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME36_ARATH4.006e-6458.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME61_ARATH1.165e-6359.07Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME32_ARATH3.391e-6358.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME47_ARATH9.866e-6360.10Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_FICAW1.289e-6260.42Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME20_ARATH4.897e-6258.03Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME25_ARATH6.395e-6259.07Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME1_SOLLC1.861e-6160.42Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME41_ARATH2.430e-6156.99Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME22_SOLLC2.430e-6159.90Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTCAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGTATGCTAGCATGTCACACCTATA
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