CF832328

Overview
NameCF832328
Unique NameCF832328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:974..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.174e-61
Identity = 111/191 (58.12%), Postives = 138/191 (72.25%), Query Frame = -1
Query:  268 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVK-GSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 837
            YRC++  YQDTLY H++RQFY  C I+GTVDFIFG+A  VFQNC I A++  PNQ+N +TAQGR DPN+ TGI IQ C I A SDL A    S  TYLGRPWK YSRTV+MQS +S+VI P GW EW+G+FAL++LFY EY N G GA   +RVKW  ++V   + +A+ YT A FI G+ WL STG  ++
Sbjct:  327 YRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.174e-61
Identity = 109/193 (56.48%), Postives = 133/193 (68.91%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            Y C   AYQDTLY HSLRQFY  C + GTVDFIFGNAA VFQNC+++ R+P PNQ N +TAQGR DPNQNTG  IQ C I    DL++   + +TYLGRPWK YSRTV MQS I   + P GW EW+G+FAL TL+YAEY NTG G++T+NRV W  + VI S  +A  +T       + W+  TG P++ GL
Sbjct:  386 YSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.145e-61
Identity = 113/193 (58.55%), Postives = 134/193 (69.43%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC+++ YQDTLYVHS RQF+  C I GTVDFIFGNAA V QNC I+AR+P   Q+N +TAQ R DPNQNTGI I   R+ A SDL A  GS +TYLGRPWK +SRTV M S I   ++  GW EW+  FALDTL+Y EY N+G G+    RV W  ++VI S AEA  +T A FI GS+WL STG  F  GL
Sbjct:  404 YRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.206e-60
Identity = 113/192 (58.85%), Postives = 133/192 (69.27%), Query Frame = -1
Query:  259 RCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 834
            RC + AYQDTLY HS RQFY    + GTVDFIFGNAA VFQ C I AR+PN  Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   ++TYLGRPWK++SRTVVMQS +   I+P+GW+EW G+FAL TL+Y E+ N G GA TS RVKW  + VIT   EA  +T A  I G +WL ST   +  GL
Sbjct:  351 RCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.583e-60
Identity = 109/192 (56.77%), Postives = 136/192 (70.83%), Query Frame = -1
Query:  262 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLG 837
            YRC+   YQDTLYVHS +QFY  C I GT+DFIFGNAA VFQN  ++AR+PNP  +   TAQ R+  +Q TGI I  CRI A  DL+ VK +F+ YLGRPW++YSRTV+++S I D+I+PAGW E   +FAL+TL+Y EY N G GA+ + RV W  F+ I +  EA  +T   FI GSTWL STG PFSLG
Sbjct:  340 YRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.021e-59
Identity = 112/192 (58.33%), Postives = 133/192 (69.27%), Query Frame = -1
Query:  259 RCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 834
            RC + AYQDTLY HS RQFY    + GT+DFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   F TYLGRPWK+YSRTVVM+S +  +I+P+GW EW G+FAL TL+Y E+ N G GA TS RVKW  + VIT  AEA ++T A  I G +WL ST   +  GL
Sbjct:  357 RCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.333e-59
Identity = 105/193 (54.40%), Postives = 140/193 (72.54%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC   +YQDT+YVHS +QFY  C I GTVDFIFG+A+ VFQNC ++ARRPNPNQ+ + TAQGR++  + TGI I   RI A  DL+ V+ +F+ YLGRPW+ YSRTV+M+S I D+++PAGW +W  +FAL+TL+Y EY N G G++ +NRV+W  FK I +  EA  ++   FI G+ WL ST  PF+L L
Sbjct:  326 YRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 7.317e-58
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            +RC M  YQDTLY H++RQFY  C I GTVDFIFG+   VFQNC I A+R  PNQ+N +TAQGR D NQ +G  IQ   I A +DL+    +  TYLGRPWK YSRTV +++++SDV+ P GW EW+ +FALDTLFY E+ N G G+  S+RVKW  + V  ++ +A  +T + FI G+ WL STG  FS GL
Sbjct:  331 FRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.780e-57
Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            Y+C +  YQDTL VHS RQFY  C I GTVDFIFGNAAAVFQNC I  RRP   Q N++TAQGR DP QNTGI I   RI    DL  V G+ +TY+GRPW ++SRTVV+Q+ + +V++P GW  W     F LDTLFYAEY+NTG  + T  RV W  F V+  A++A  +T   FIAG+ WL  TG PF+ GL
Sbjct:  342 YKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.631e-57
Identity = 111/193 (57.51%), Postives = 129/193 (66.84%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            +RC +  YQD+LY HS RQFY    I GTVDFIFGN+A VFQ+C+I AR+P P QRN VTAQGR +P QNTGI IQ CRI A S          TYLGRPWK YSRTVVMQS I   I+P+GW  WSG F L +LFY EY N+G G+  S RVKWS      +  EA+ +T A+FI G+ WL STG  F  GL
Sbjct:  333 HRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME_PRUPE3.174e-6158.12Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME7_ARATH3.174e-6156.48Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME34_ARATH4.145e-6158.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_SOLLC1.206e-6058.85Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME39_ARATH4.583e-6056.77Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME21_SOLLC1.021e-5958.33Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME40_ARATH1.333e-5954.40Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME44_ARATH7.317e-5853.89Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME59_ARATH2.780e-5755.90Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME16_ARATH3.631e-5757.51Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTCAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGTATGCTAGCATGTCACACCTATA
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