CF832328

Overview
NameCF832328
Unique NameCF832328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:974..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.087e-53
Identity = 103/192 (53.65%), Postives = 128/192 (66.67%), Query Frame = -1
Query:  259 CDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 831
            C    YQDTLY ++ RQ+Y SC+I GTVDFIFG+AAA+FQNCDI  R+  P Q+N VTAQGR D  Q TG VI  C +    DL  VK  F++YLGRPWK +SRTVVM+S I DVI+P GW  W   +FA+DTL YAEY+N G    T+ RVKW  F+V+ +  EA  +T   F+ G  W+ + G P  LGL
Sbjct:  417 CRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQGE-WIQAIGSPVKLGL 606          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.693e-52
Identity = 101/190 (53.16%), Postives = 123/190 (64.74%), Query Frame = -1
Query:  271 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF-ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 837
            +RC    +QDTLY HS RQFY  C I GT+DFIFGNAA VFQ+C I  R+P PNQ N +TAQG+ DPNQNTGI+IQK  I    + L       TYLGRPWK +S TV+MQSDI  ++NP GW  W  N     T+FYAEYQN+G GAD S RVKW+ +K   +   A+ +T  +FI G  WL +    F
Sbjct:  392 FRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGNNLTA----PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52
Identity = 101/192 (52.60%), Postives = 125/192 (65.10%), Query Frame = -1
Query:  268 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS--GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 837
            YRC +  YQDTL VHS RQFY  C I GTVDFIFGNAA VFQNC I  R P   Q N++TAQGR D  QNTGI I    I    DL  V  S +TY+GRPW  YSRTVV+++ I  V++P GW  W+    + LDTLFYAEY+N G  + T  RV+W  F V++ A++A  ++   FIAG+ WL  +G PF+
Sbjct:  346 YRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFT 537          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.000e-52
Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = -1
Query:  268 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 837
            + C M  YQDTLYVH+ RQFY +C ++GT+DF+FG+A AVFQNC+   RRP  +Q+ +VTAQGR D  + TGIVI   RI   +  L VK     +LGRPWK +SRT++M ++I DVI+P GW +W+  FAL+TLFY EY+N G G+    RV+W   K I+  A A+ +   NF+ G+TW+  T  P++
Sbjct:  511 FNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRA-AREFAPGNFLRGNTWIPQTRIPYN 699          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.337e-51
Identity = 92/189 (48.68%), Postives = 127/189 (67.20%), Query Frame = -1
Query:  271 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 837
            Y C +  YQDTLYVHS RQF+  C ++GTVDFIFG+   V QNC+I  R+P  +Q  M+TAQGR D  ++TG+V+Q C I      + VK   + YLGRPWK +SRT++M + I DVI+PAGW  W+G+FAL+TL+YAEY+N G G++ + RVKW   K + S  +A  +T A F+ G+ W+     P+
Sbjct:  379 YNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.337e-51
Identity = 93/190 (48.95%), Postives = 127/190 (66.84%), Query Frame = -1
Query:  268 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 837
            + C +  +QDTLYVHS RQFY  C ++GTVDFIFG+A  + QNC I  R+PN  Q  MVTAQGR +  ++TG+V+  C I      + +K   + YLGRPWK +SRT++M++ I DVI+PAGW  WSG+FAL TL+YAE+ NTG G++ + RVKW   K +T   +A  YT   F+ G TW+  T  P++
Sbjct:  377 HSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.978e-51
Identity = 100/193 (51.81%), Postives = 121/193 (62.69%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC +  YQD LY H  RQFY  C I GTVDFI GNAAAVFQ C I AR+PN  Q N +TAQ R+  +  +G  IQ C I A+SDL     + +TYLGRPW+ +S   V+QS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  +  P+  GL
Sbjct:  334 YRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.978e-51
Identity = 102/193 (52.85%), Postives = 121/193 (62.69%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC +  YQD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQKC I A+SDL     + +TYLGRPW+ +S   VMQS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  T  P+  GL
Sbjct:  334 YRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.131e-50
Identity = 103/194 (53.09%), Postives = 127/194 (65.46%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRI-GATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC +  YQDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC I AR P PN  N +TAQ R +PNQ TGIVI    + GA    L   G  +TYLGRPW+ Y+RTVV+ + +  +I P GW +W    AL TL+Y EYQN+G G+ T NRV W+ F VI+   EA+ +T   FI  ++WL  T  PF++ L
Sbjct:  285 YRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL---GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.478e-50
Identity = 99/193 (51.30%), Postives = 120/193 (62.18%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            YRC +  YQD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQ C I  +SDL     + +TYLGRPW+R+S   V+QS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  +  P+  GL
Sbjct:  307 YRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME45_ARATH7.087e-5353.65Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU2.693e-5253.16Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME60_ARATH4.594e-5252.60Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME43_ARATH6.000e-5248.95Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME58_ARATH1.337e-5148.68Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME23_ARATH1.337e-5148.95Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME42_ARATH2.978e-5151.81Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME19_ARATH2.978e-5152.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME38_ARATH1.131e-5053.09Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME30_ARATH1.478e-5051.30Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTCAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGTATGCTAGCATGTCACACCTATA
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